Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 Y_RNA.261-201ENST00000364631 102 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 Y_RNA.286-201ENST00000364813 102 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 Y_RNA.308-201ENST00000365043 101 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 AL358453.1-201ENST00000422522 250 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 CR769767.1-201ENST00000436337 346 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 USP9YP7-201ENST00000436723 430 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 RANP8-201ENST00000444720 713 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 EIF4A1P11-201ENST00000451239 222 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 USP9YP32-201ENST00000452432 430 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 AC023632.4-201ENST00000517783 191 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 RMST_4.1-201ENST00000616886 107 ntBASIC5.63□□□□□ -1.51
RC3H1Q5TC82 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 SNORA25.1-201ENST00000362326 128 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 Y_RNA.215-201ENST00000364204 112 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 Y_RNA.534-201ENST00000384599 112 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 RNU6-1179P-201ENST00000384667 107 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 AC104333.2-201ENST00000422630 192 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 CKS1BP6-201ENST00000424932 240 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 MRPL48P1-201ENST00000445390 636 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 AC073587.1-201ENST00000447093 876 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 RN7SL132P-201ENST00000478131 296 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 RNU7-175P-201ENST00000515915 61 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 RNU1-86P-201ENST00000516108 154 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 RNU1-107P-201ENST00000516617 154 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 AC107918.3-201ENST00000533272 382 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 MIR4286-201ENST00000580651 93 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 RPL23AP78-201ENST00000599928 470 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 AL359881.1-201ENST00000602916 267 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.62□□□□□ -1.51
RC3H1Q5TC82 ZNF826P-207ENST00000622273 1910 ntBASIC5.62□□□□□ -1.51
RC3H1Q5TC82 AC010300.1-201ENST00000600671 5134 ntBASIC5.61□□□□□ -1.51
RC3H1Q5TC82 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 UBE2WP1-201ENST00000362030 340 ntBASIC5.61□□□□□ -1.51
RC3H1Q5TC82 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 RNA5SP44-201ENST00000410446 133 ntBASIC5.61□□□□□ -1.51
RC3H1Q5TC82 PHKBP1-201ENST00000450951 1951 ntBASIC5.61□□□□□ -1.51
RC3H1Q5TC82 AC091179.1-201ENST00000461606 579 ntBASIC5.61□□□□□ -1.51
RC3H1Q5TC82 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 YWHAEP4-201ENST00000505390 198 ntBASIC5.61□□□□□ -1.51
RC3H1Q5TC82 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 AP000787.2-201ENST00000604432 568 ntBASIC5.61□□□□□ -1.51
RC3H1Q5TC82 AC084757.4-201ENST00000616350 526 ntBASIC5.61□□□□□ -1.51
RC3H1Q5TC82 AC073349.3-201ENST00000617616 186 ntBASIC5.61□□□□□ -1.51
RC3H1Q5TC82 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
RC3H1Q5TC82 AC100778.3-201ENST00000580060 1750 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AL133243.3-201ENST00000617415 3004 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 Y_RNA.43-201ENST00000362670 111 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 RNU6-1301P-201ENST00000362724 104 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 RNA5SP513-201ENST00000364648 118 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 RNU6-1289P-201ENST00000384431 106 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 RNU6-257P-201ENST00000410238 98 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AC009237.10-201ENST00000414112 510 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 HMGB1P27-201ENST00000431429 603 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AC010683.1-201ENST00000473673 378 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 RNA5SP497-201ENST00000516081 97 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 MIR892C-201ENST00000516410 77 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms