Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 AP000560.1-201ENST00000624150 1937 ntBASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL13A1Q5TAT6 FTLP6-201ENST00000355274 422 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.84-201ENST00000363011 104 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 RNU6-1317P-201ENST00000364582 104 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 RNU6-338P-201ENST00000383888 105 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AL592045.1-201ENST00000429867 352 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 MYL8P-204ENST00000431574 518 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AC004938.1-201ENST00000438468 308 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 RPL26P6-201ENST00000440913 438 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AC106707.2-201ENST00000484182 374 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AC022493.1-201ENST00000492984 337 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 RPS23P5-201ENST00000495419 428 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 RNU1-86P-201ENST00000516108 154 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 RNU4-71P-201ENST00000516258 113 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 RNU1-107P-201ENST00000516617 154 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 FKBP1BP1-201ENST00000553366 325 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AL161713.1-201ENST00000555538 145 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AMZ2P1-203ENST00000565833 850 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AC010201.1-201ENST00000605051 540 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 FAM27D1-201ENST00000612308 341 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AP001282.2-201ENST00000616149 309 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AC006386.2-201ENST00000624491 75 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AC012005.1-201ENST00000624575 75 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 AL391684.1-202ENST00000641293 1636 ntBASIC4.9□□□□□ -1.63
COL13A1Q5TAT6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 AL157777.2-201ENST00000258070 137 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 AL391987.6-201ENST00000305671 199 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.33-201ENST00000362591 102 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 SNORD81.1-201ENST00000363064 77 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 RNU6-280P-201ENST00000364145 104 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 U3.13-201ENST00000364804 214 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 RNU6-121P-201ENST00000410525 99 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 EI24P1-201ENST00000416584 867 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 RPL21P38-201ENST00000418090 167 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 AL157831.1-201ENST00000426134 473 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 SDAD1P3-201ENST00000427380 333 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 KC877373.1-201ENST00000479066 408 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 Vault.1-201ENST00000516474 102 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 AC022868.1-201ENST00000517767 391 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 AC022884.2-201ENST00000578535 580 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 AC123912.5-201ENST00000605470 343 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL13A1Q5TAT6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AC004817.4-201ENST00000602396 3625 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms