Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 ARF4P1-201ENST00000605447 541 ntBASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 AC015813.4-201ENST00000610469 179 ntBASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 MIR5701-2-201ENST00000615634 82 ntBASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 AC007792.1-201ENST00000623023 402 ntBASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SNAP47Q5SQN1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNAP47Q5SQN1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
SNAP47Q5SQN1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.4□□□□□ -1.7
SNAP47Q5SQN1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.4□□□□□ -1.7
SNAP47Q5SQN1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNAP47Q5SQN1 ZFRP1-201ENST00000457579 2970 ntBASIC4.4□□□□□ -1.7
SNAP47Q5SQN1 RNU6-50P-201ENST00000362356 103 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RNA5SP502-201ENST00000362694 119 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 Y_RNA.152-201ENST00000363578 100 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RNY3P11-201ENST00000364153 102 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RNA5SP509-201ENST00000364577 119 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 SNORD14.1-201ENST00000365609 90 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 EIF4HP2-201ENST00000424380 563 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 MTND3P9-201ENST00000429526 346 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AL358472.1-201ENST00000431295 329 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AC011998.1-201ENST00000433403 117 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AC069285.2-201ENST00000440210 275 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RN7SL817P-201ENST00000480777 288 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RN7SKP122-201ENST00000515923 296 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RNU6-377P-201ENST00000515965 102 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RNU6-1282P-201ENST00000516735 96 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RNA5SP468-201ENST00000516782 93 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RNU6-703P-201ENST00000516946 107 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AC131281.1-201ENST00000522984 164 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 MIR3939-201ENST00000582614 106 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 HMGB1P50-201ENST00000605814 607 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AC006023.2-201ENST00000609916 167 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 MIR1244-1-201ENST00000612829 85 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 AL713922.2-201ENST00000619384 716 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 SCARNA4-202ENST00000625402 129 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 MIR1244-3-201ENST00000635744 85 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 MIR1244-2-201ENST00000636449 85 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 MIR1244-4-202ENST00000636813 85 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 U4.7-201ENST00000638126 106 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 MTND5P27-201ENST00000428871 1720 ntBASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNAP47Q5SQN1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 RNU6-78P-201ENST00000362897 107 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 U3.6-201ENST00000363622 211 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 RNU6-595P-201ENST00000363944 107 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 RNU6-217P-201ENST00000384164 104 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 MT-TG-201ENST00000387429 68 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 RNA5SP372-201ENST00000390836 115 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AL592291.1-201ENST00000403830 352 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 MIR1252-201ENST00000408861 65 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 RNA5SP129-201ENST00000410276 118 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 CKS1BP6-201ENST00000424932 240 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AC108059.2-201ENST00000434626 151 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AC133473.1-201ENST00000455173 299 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AC009812.2-201ENST00000517657 457 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 CASP1P1-201ENST00000526345 212 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 TOMM20P2-201ENST00000540082 421 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 ZNF192P1-203ENST00000565888 810 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AC006600.1-201ENST00000572529 153 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AL355598.1-201ENST00000604169 202 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AC100812.1-201ENST00000607622 580 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 FTX_3.1-201ENST00000610451 147 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AC009318.2-201ENST00000610917 651 ntBASIC4.39□□□□□ -1.71
SNAP47Q5SQN1 AC005086.4-201ENST00000623065 213 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms