Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC104383.1-201ENST00000530297 370 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.25□□□□□ -1.89
CLCN3P51790 CYCSP39-201ENST00000565821 309 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCN3P51790 AP001596.2-201ENST00000608410 312 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AL365204.3-201ENST00000612448 685 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AL138880.2-201ENST00000616214 239 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AL008636.1-201ENST00000625038 1018 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AC005609.4-201ENST00000625071 447 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCN3P51790 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCN3P51790 LRRC77P-213ENST00000637727 880 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCN3P51790 AL021368.2-201ENST00000606125 5352 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 FAM35BP-202ENST00000497389 3337 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 SRP72P2-201ENST00000344851 1979 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AL049641.1-201ENST00000441055 1948 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLCN3P51790 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.24□□□□□ -1.89
CLCN3P51790 Y_RNA.89-201ENST00000363031 102 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
CLCN3P51790 SMIM11P1-201ENST00000369586 178 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 RNU6-701P-201ENST00000384059 107 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 RNU6-39P-201ENST00000384344 107 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 RNU6-908P-201ENST00000410160 94 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AC092047.1-201ENST00000424997 240 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 DPPA2P1-201ENST00000428060 556 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 HMGB1P27-201ENST00000431429 603 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCN3P51790 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCN3P51790 NFU1P2-201ENST00000448700 469 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 RNU6-953P-201ENST00000459154 107 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AL160314.1-201ENST00000490836 438 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AC023194.1-201ENST00000493084 308 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.24□□□□□ -1.89
CLCN3P51790 TTC39CP1-201ENST00000512513 755 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 SCARNA24.1-201ENST00000516465 137 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCN3P51790 AL359212.1-201ENST00000556608 614 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AC034105.3-201ENST00000565294 442 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AC025678.1-201ENST00000567861 338 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 MIR4474-201ENST00000579189 78 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AP000907.4-201ENST00000604143 237 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AC104763.2-201ENST00000604179 382 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AL136363.1-201ENST00000605349 337 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AC008536.2-201ENST00000607284 349 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 AC009161.2-201ENST00000624626 138 ntBASIC3.24□□□□□ -1.89
CLCN3P51790 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CLCN3P51790 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCN3P51790 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLCN3P51790 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCN3P51790 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCN3P51790 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLCN3P51790 Y_RNA.22-201ENST00000362492 102 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 RNU6-1085P-201ENST00000363576 107 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCN3P51790 RNU6-483P-201ENST00000384088 108 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 Y_RNA.453-201ENST00000384223 109 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 RNU6-74P-201ENST00000384235 107 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 RNU6-14P-201ENST00000384630 106 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 EI24P2-201ENST00000397776 1076 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 RNU2-39P-201ENST00000410604 198 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLCN3P51790 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCN3P51790 MTATP6P18-201ENST00000417994 673 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCN3P51790 RPS20P5-201ENST00000434808 360 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 HMGN2P20-201ENST00000437531 273 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 AL121601.2-201ENST00000438019 707 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 BNIP3P2-201ENST00000441221 577 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCN3P51790 NEFMP1-201ENST00000443423 1006 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCN3P51790 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCN3P51790 AC125238.1-201ENST00000448842 249 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 FDX1P2-201ENST00000450769 375 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 MTCYBP18-201ENST00000501056 747 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.23□□□□□ -1.89
CLCN3P51790 AC117522.1-201ENST00000509821 380 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 HIGD1AP13-201ENST00000509878 289 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCN3P51790 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCN3P51790 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCN3P51790 SUB1P2-201ENST00000556401 297 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 GTF3AP2-201ENST00000557014 266 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCN3P51790 AC107294.1-201ENST00000609524 467 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 AC068831.7-201ENST00000616954 363 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 AC092794.2-201ENST00000620933 563 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 AC139792.3-201ENST00000623525 224 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCN3P51790 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCN3P51790 AC004972.1-201ENST00000623934 2209 ntBASIC3.23□□□□□ -1.89
CLCN3P51790 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCN3P51790 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCN3P51790 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CLCN3P51790 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCN3P51790 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms