Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC009314.1-201ENST00000603871 304 ntBASIC4.37□□□□□ -1.71
CCNFP41002 MIR1244-1-201ENST00000612829 85 ntBASIC4.37□□□□□ -1.71
CCNFP41002 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.37□□□□□ -1.71
CCNFP41002 MIR1244-3-201ENST00000635744 85 ntBASIC4.37□□□□□ -1.71
CCNFP41002 MIR1244-2-201ENST00000636449 85 ntBASIC4.37□□□□□ -1.71
CCNFP41002 MIR1244-4-202ENST00000636813 85 ntBASIC4.37□□□□□ -1.71
CCNFP41002 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNFP41002 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.37□□□□□ -1.71
CCNFP41002 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.37□□□□□ -1.71
CCNFP41002 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCNFP41002 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNFP41002 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNFP41002 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNFP41002 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNFP41002 MFSD8-216ENST00000641147 4009 ntBASIC4.36□□□□□ -1.71
CCNFP41002 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNFP41002 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
CCNFP41002 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNFP41002 RNU6-50P-201ENST00000362356 103 ntBASIC4.36□□□□□ -1.71
CCNFP41002 Y_RNA.126-201ENST00000363382 111 ntBASIC4.36□□□□□ -1.71
CCNFP41002 Y_RNA.152-201ENST00000363578 100 ntBASIC4.36□□□□□ -1.71
CCNFP41002 RNA5SP505-201ENST00000364748 108 ntBASIC4.36□□□□□ -1.71
CCNFP41002 RNU6-596P-201ENST00000365395 98 ntBASIC4.36□□□□□ -1.71
CCNFP41002 Y_RNA.533-201ENST00000384596 114 ntBASIC4.36□□□□□ -1.71
CCNFP41002 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCNFP41002 RNU6-907P-201ENST00000390924 102 ntBASIC4.36□□□□□ -1.71
CCNFP41002 SNORD66.1-201ENST00000391230 76 ntBASIC4.36□□□□□ -1.71
CCNFP41002 Y_RNA.623-201ENST00000411128 95 ntBASIC4.36□□□□□ -1.71
CCNFP41002 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCNFP41002 RAC1P3-201ENST00000416129 580 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC108032.1-201ENST00000416706 207 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.36□□□□□ -1.71
CCNFP41002 NUP35P1-201ENST00000422734 947 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.36□□□□□ -1.71
CCNFP41002 AC112492.4-201ENST00000456549 352 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC083829.1-201ENST00000503756 657 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.36□□□□□ -1.71
CCNFP41002 RNA5SP468-201ENST00000516782 93 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC009812.2-201ENST00000517657 457 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.36□□□□□ -1.71
CCNFP41002 AC103996.1-201ENST00000555468 102 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.36□□□□□ -1.71
CCNFP41002 MYL12BP1-201ENST00000569826 507 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC008121.1-201ENST00000603244 268 ntBASIC4.36□□□□□ -1.71
CCNFP41002 HMGB1P24-202ENST00000615653 685 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AC090132.2-201ENST00000615881 347 ntBASIC4.36□□□□□ -1.71
CCNFP41002 RN7SL722P-201ENST00000617780 284 ntBASIC4.36□□□□□ -1.71
CCNFP41002 RN7SL565P-201ENST00000618246 284 ntBASIC4.36□□□□□ -1.71
CCNFP41002 U2.1-201ENST00000618978 145 ntBASIC4.36□□□□□ -1.71
CCNFP41002 AL713922.2-201ENST00000619384 716 ntBASIC4.36□□□□□ -1.71
CCNFP41002 MIR4727-201ENST00000622232 55 ntBASIC4.36□□□□□ -1.71
CCNFP41002 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNFP41002 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNFP41002 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCNFP41002 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
CCNFP41002 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.36□□□□□ -1.71
CCNFP41002 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.36□□□□□ -1.71
CCNFP41002 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCNFP41002 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNFP41002 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNFP41002 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.35□□□□□ -1.71
CCNFP41002 RAD17P1-201ENST00000418130 2042 ntBASIC4.35□□□□□ -1.71
CCNFP41002 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNFP41002 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNFP41002 AC007685.1-201ENST00000329806 452 ntBASIC4.35□□□□□ -1.71
CCNFP41002 SNORD14B-201ENST00000364533 90 ntBASIC4.35□□□□□ -1.71
CCNFP41002 Y_RNA.476-201ENST00000384347 108 ntBASIC4.35□□□□□ -1.71
CCNFP41002 RNU6-1109P-201ENST00000391187 107 ntBASIC4.35□□□□□ -1.71
CCNFP41002 RPS20P14-201ENST00000412545 360 ntBASIC4.35□□□□□ -1.71
CCNFP41002 SNORD56-201ENST00000413522 71 ntBASIC4.35□□□□□ -1.71
CCNFP41002 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.35□□□□□ -1.71
CCNFP41002 RPL23AP1-201ENST00000428990 471 ntBASIC4.35□□□□□ -1.71
CCNFP41002 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.35□□□□□ -1.71
CCNFP41002 AL132765.1-201ENST00000434165 553 ntBASIC4.35□□□□□ -1.71
CCNFP41002 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNFP41002 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNFP41002 CHEK2P4-201ENST00000450340 246 ntBASIC4.35□□□□□ -1.71
CCNFP41002 AC025554.1-201ENST00000505641 188 ntBASIC4.35□□□□□ -1.71
CCNFP41002 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.35□□□□□ -1.71
CCNFP41002 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNFP41002 RNA5SP165-201ENST00000517142 115 ntBASIC4.35□□□□□ -1.71
CCNFP41002 AC022616.4-201ENST00000522985 181 ntBASIC4.35□□□□□ -1.71
CCNFP41002 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNFP41002 AC006600.1-201ENST00000572529 153 ntBASIC4.35□□□□□ -1.71
CCNFP41002 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNFP41002 AC004852.3-201ENST00000614131 326 ntBASIC4.35□□□□□ -1.71
CCNFP41002 AC008785.1-201ENST00000624475 456 ntBASIC4.35□□□□□ -1.71
CCNFP41002 MIR4272-201ENST00000635924 64 ntBASIC4.35□□□□□ -1.71
CCNFP41002 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNFP41002 MARK2P15-201ENST00000432204 2186 ntBASIC4.35□□□□□ -1.71
CCNFP41002 AC008669.1-201ENST00000565823 2178 ntBASIC4.35□□□□□ -1.71
CCNFP41002 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNFP41002 AC018555.1-201ENST00000567548 1980 ntBASIC4.34□□□□□ -1.71
CCNFP41002 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCNFP41002 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNFP41002 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
CCNFP41002 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNFP41002 RNA5SP388-201ENST00000362584 119 ntBASIC4.34□□□□□ -1.71
CCNFP41002 U8.8-201ENST00000365399 135 ntBASIC4.34□□□□□ -1.71
CCNFP41002 SNORA63.7-201ENST00000365579 123 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms