Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ZNF863P-201ENST00000426746 417 ntBASIC0.73□□□□□ -2.29
SNCAP37840 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.73□□□□□ -2.29
SNCAP37840 USP9YP24-201ENST00000434374 697 ntBASIC0.73□□□□□ -2.29
SNCAP37840 AC017099.1-201ENST00000448261 1028 ntBASIC0.73□□□□□ -2.29
SNCAP37840 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.73□□□□□ -2.29
SNCAP37840 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.73□□□□□ -2.29
SNCAP37840 FCF1P6-201ENST00000456841 595 ntBASIC0.73□□□□□ -2.29
SNCAP37840 CYP2C59P-201ENST00000457790 269 ntBASIC0.73□□□□□ -2.29
SNCAP37840 RPL30P7-201ENST00000479312 323 ntBASIC0.73□□□□□ -2.29
SNCAP37840 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.73□□□□□ -2.29
SNCAP37840 AL163540.1-201ENST00000485382 386 ntBASIC0.73□□□□□ -2.29
SNCAP37840 RPS23P4-201ENST00000487908 423 ntBASIC0.73□□□□□ -2.29
SNCAP37840 AC112198.4-201ENST00000515450 351 ntBASIC0.73□□□□□ -2.29
SNCAP37840 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.73□□□□□ -2.29
SNCAP37840 AC006199.1-201ENST00000548728 219 ntBASIC0.73□□□□□ -2.29
SNCAP37840 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.73□□□□□ -2.29
SNCAP37840 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SNCAP37840 NIFKP6-201ENST00000598115 845 ntBASIC0.73□□□□□ -2.29
SNCAP37840 TUG1_1.1-201ENST00000610654 145 ntBASIC0.73□□□□□ -2.29
SNCAP37840 AC092608.3-201ENST00000625017 386 ntBASIC0.73□□□□□ -2.29
SNCAP37840 AC017104.5-201ENST00000637647 639 ntBASIC0.73□□□□□ -2.29
SNCAP37840 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
SNCAP37840 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
SNCAP37840 AC110491.1-201ENST00000562191 2010 ntBASIC0.72□□□□□ -2.29
SNCAP37840 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
SNCAP37840 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SNCAP37840 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SNCAP37840 RNU5A-1-201ENST00000362698 116 ntBASIC0.72□□□□□ -2.29
SNCAP37840 RNU6-251P-201ENST00000363235 104 ntBASIC0.72□□□□□ -2.29
SNCAP37840 RNA5SP99-201ENST00000364020 114 ntBASIC0.72□□□□□ -2.29
SNCAP37840 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
SNCAP37840 RNU6-741P-201ENST00000383889 107 ntBASIC0.72□□□□□ -2.29
SNCAP37840 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
SNCAP37840 AL160275.3-201ENST00000423876 471 ntBASIC0.72□□□□□ -2.29
SNCAP37840 PRPS1P1-201ENST00000445305 876 ntBASIC0.72□□□□□ -2.29
SNCAP37840 AL137159.1-201ENST00000452808 512 ntBASIC0.72□□□□□ -2.29
SNCAP37840 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.72□□□□□ -2.29
SNCAP37840 AC109927.2-201ENST00000506416 303 ntBASIC0.72□□□□□ -2.29
SNCAP37840 AC022483.1-201ENST00000514020 567 ntBASIC0.72□□□□□ -2.29
SNCAP37840 RNU7-40P-201ENST00000516397 64 ntBASIC0.72□□□□□ -2.29
SNCAP37840 SNORA48.11-201ENST00000517015 89 ntBASIC0.72□□□□□ -2.29
SNCAP37840 HIGD1AP6-201ENST00000521833 279 ntBASIC0.72□□□□□ -2.29
SNCAP37840 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.72□□□□□ -2.29
SNCAP37840 LSM6P2-201ENST00000552208 177 ntBASIC0.72□□□□□ -2.29
SNCAP37840 AC021739.1-201ENST00000559631 174 ntBASIC0.72□□□□□ -2.29
SNCAP37840 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.72□□□□□ -2.29
SNCAP37840 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.72□□□□□ -2.29
SNCAP37840 AL391597.1-201ENST00000618707 694 ntBASIC0.72□□□□□ -2.29
SNCAP37840 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.72□□□□□ -2.29
SNCAP37840 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SNCAP37840 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCAP37840 MIR561-201ENST00000385216 97 ntBASIC0.71□□□□□ -2.3
SNCAP37840 RNU6-482P-201ENST00000391068 107 ntBASIC0.71□□□□□ -2.3
SNCAP37840 ATP5F1P6-201ENST00000402768 767 ntBASIC0.71□□□□□ -2.3
SNCAP37840 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCAP37840 BEND7P1-201ENST00000422058 457 ntBASIC0.71□□□□□ -2.3
SNCAP37840 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCAP37840 AL365400.1-201ENST00000431854 640 ntBASIC0.71□□□□□ -2.3
SNCAP37840 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.71□□□□□ -2.3
SNCAP37840 MTND1P33-201ENST00000446251 917 ntBASIC0.71□□□□□ -2.3
SNCAP37840 RPS27P1-201ENST00000450552 247 ntBASIC0.71□□□□□ -2.3
SNCAP37840 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.71□□□□□ -2.3
SNCAP37840 RPS15AP17-201ENST00000470598 390 ntBASIC0.71□□□□□ -2.3
SNCAP37840 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SNCAP37840 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCAP37840 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCAP37840 AC103851.1-201ENST00000506833 274 ntBASIC0.71□□□□□ -2.3
SNCAP37840 SNORD19.2-201ENST00000516978 73 ntBASIC0.71□□□□□ -2.3
SNCAP37840 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SNCAP37840 SNRPGP17-201ENST00000603780 214 ntBASIC0.71□□□□□ -2.3
SNCAP37840 BX322635.1-201ENST00000605804 496 ntBASIC0.71□□□□□ -2.3
SNCAP37840 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCAP37840 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.71□□□□□ -2.3
SNCAP37840 MIR8074-201ENST00000615081 81 ntBASIC0.71□□□□□ -2.3
SNCAP37840 AL136313.1-201ENST00000624804 202 ntBASIC0.71□□□□□ -2.3
SNCAP37840 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SNCAP37840 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SNCAP37840 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
SNCAP37840 Y_RNA.327-201ENST00000365201 102 ntBASIC0.7□□□□□ -2.3
SNCAP37840 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SNCAP37840 MIR29C-201ENST00000385231 88 ntBASIC0.7□□□□□ -2.3
SNCAP37840 AL139098.1-201ENST00000407291 389 ntBASIC0.7□□□□□ -2.3
SNCAP37840 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.7□□□□□ -2.3
SNCAP37840 AC245047.4-201ENST00000433189 144 ntBASIC0.7□□□□□ -2.3
SNCAP37840 AL161788.1-201ENST00000441805 169 ntBASIC0.7□□□□□ -2.3
SNCAP37840 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.7□□□□□ -2.3
SNCAP37840 RPS4XP11-201ENST00000446897 772 ntBASIC0.7□□□□□ -2.3
SNCAP37840 COX6CP14-201ENST00000469580 174 ntBASIC0.7□□□□□ -2.3
SNCAP37840 AC093767.1-201ENST00000504523 156 ntBASIC0.7□□□□□ -2.3
SNCAP37840 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.7□□□□□ -2.3
SNCAP37840 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.7□□□□□ -2.3
SNCAP37840 AP003122.4-201ENST00000530980 758 ntBASIC0.7□□□□□ -2.3
SNCAP37840 RAB11AP2-201ENST00000545905 639 ntBASIC0.7□□□□□ -2.3
SNCAP37840 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.7□□□□□ -2.3
SNCAP37840 AC012414.6-201ENST00000568241 401 ntBASIC0.7□□□□□ -2.3
SNCAP37840 AP000942.3-201ENST00000603702 160 ntBASIC0.7□□□□□ -2.3
SNCAP37840 RNU6-884P-201ENST00000363889 107 ntBASIC0.69□□□□□ -2.3
SNCAP37840 RNU1-57P-201ENST00000384491 166 ntBASIC0.69□□□□□ -2.3
SNCAP37840 FGF7P8-201ENST00000402994 292 ntBASIC0.69□□□□□ -2.3
SNCAP37840 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms