Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXC12P31275 AC020890.1-201ENST00000491837 504 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 Y_RNA.721-201ENST00000517207 102 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXC12P31275 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXC12P31275 AC113195.1-201ENST00000579952 141 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXC12P31275 MIR3939-201ENST00000582614 106 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 SNORD58B-201ENST00000607313 66 ntBASIC4.09□□□□□ -1.75
HOXC12P31275 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXC12P31275 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC12P31275 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC12P31275 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HOXC12P31275 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.09□□□□□ -1.76
HOXC12P31275 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC12P31275 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HOXC12P31275 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC12P31275 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXC12P31275 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC12P31275 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC12P31275 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC12P31275 RNA5SP509-201ENST00000364577 119 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 RNU6-450P-201ENST00000364654 107 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.08□□□□□ -1.76
HOXC12P31275 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
HOXC12P31275 SNORA37-201ENST00000384504 129 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HOXC12P31275 AL591034.2-201ENST00000402839 359 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 PPIAP31-201ENST00000405422 495 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 MIR1302-3-201ENST00000408128 138 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXC12P31275 AL117339.3-201ENST00000418733 162 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC12P31275 CKS1BP6-201ENST00000424932 240 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC12P31275 AC098614.2-201ENST00000426040 255 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AL512844.2-201ENST00000433990 593 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC12P31275 RPL21P104-201ENST00000464143 478 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AC011276.1-201ENST00000469688 323 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 RPL36AP41-201ENST00000493820 306 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC12P31275 AC015795.1-201ENST00000513669 327 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 RNU6-377P-201ENST00000515965 102 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 RNA5SP468-201ENST00000516782 93 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 RN7SKP289-201ENST00000517244 295 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AC109479.2-201ENST00000517842 174 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AP005902.1-201ENST00000521358 186 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC12P31275 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXC12P31275 MIR3690-201ENST00000580266 75 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC12P31275 VN1R85P-201ENST00000601587 426 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 SNX18P1Y-201ENST00000616231 511 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AP005019.3-201ENST00000620418 560 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 AF127577.6-201ENST00000623352 2191 ntBASIC4.08□□□□□ -1.76
HOXC12P31275 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC12P31275 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC12P31275 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HOXC12P31275 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HOXC12P31275 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC12P31275 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC12P31275 RNU6-428P-201ENST00000362942 107 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 RNU6-238P-201ENST00000363313 106 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 Y_RNA.153-201ENST00000363615 91 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 RNU1-64P-201ENST00000365443 163 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 Y_RNA.533-201ENST00000384596 114 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 RPS12P10-201ENST00000427031 377 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 AL159987.2-201ENST00000432754 307 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC12P31275 HMGB1P12-201ENST00000438594 598 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 AL356535.1-201ENST00000440335 398 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC12P31275 RN7SKP46-201ENST00000515942 234 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 RNU6-475P-201ENST00000516073 104 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 Y_RNA.687-201ENST00000516558 91 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 RNU6-635P-201ENST00000516651 102 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 AP002404.1-201ENST00000532005 451 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXC12P31275 RN7SL435P-201ENST00000584418 282 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC12P31275 7SK.7-201ENST00000603504 247 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 AC006023.2-201ENST00000609916 167 ntBASIC4.07□□□□□ -1.76
HOXC12P31275 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HOXC12P31275 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC12P31275 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC12P31275 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HOXC12P31275 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC12P31275 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC12P31275 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
HOXC12P31275 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
HOXC12P31275 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC12P31275 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC12P31275 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HOXC12P31275 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC12P31275 FTLP6-201ENST00000355274 422 ntBASIC4.06□□□□□ -1.76
HOXC12P31275 RNU5E-7P-201ENST00000365290 117 ntBASIC4.06□□□□□ -1.76
HOXC12P31275 DEFB109C-201ENST00000382575 264 ntBASIC4.06□□□□□ -1.76
HOXC12P31275 DEFB109B-201ENST00000382656 264 ntBASIC4.06□□□□□ -1.76
HOXC12P31275 Y_RNA.401-201ENST00000383965 117 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms