Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 AC109479.2-201ENST00000517842 174 ntBASIC5.07□□□□□ -1.6
ATP4AP20648 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.07□□□□□ -1.6
ATP4AP20648 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.07□□□□□ -1.6
ATP4AP20648 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.07□□□□□ -1.6
ATP4AP20648 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP4AP20648 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.07□□□□□ -1.6
ATP4AP20648 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP4AP20648 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.07□□□□□ -1.6
ATP4AP20648 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP4AP20648 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATP4AP20648 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.06□□□□□ -1.6
ATP4AP20648 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
ATP4AP20648 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATP4AP20648 RNU1-83P-201ENST00000363426 164 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 U3.6-201ENST00000363622 211 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 SNORA36C-201ENST00000384289 132 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 AL592291.1-201ENST00000403830 352 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 RNU2-20P-201ENST00000410425 191 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 RNU6-1025P-201ENST00000410629 104 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.06□□□□□ -1.6
ATP4AP20648 AC020890.1-201ENST00000491837 504 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 RNU6-1012P-201ENST00000516606 109 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 AC025755.1-201ENST00000521306 278 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 AC103996.1-201ENST00000555468 102 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.06□□□□□ -1.6
ATP4AP20648 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATP4AP20648 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATP4AP20648 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATP4AP20648 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATP4AP20648 CPHL1P-201ENST00000461341 3407 ntBASIC5.06□□□□□ -1.6
ATP4AP20648 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
ATP4AP20648 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.05□□□□□ -1.6
ATP4AP20648 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.05□□□□□ -1.6
ATP4AP20648 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 NCAPGP1-201ENST00000505112 1814 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 AL592182.3-201ENST00000642132 3304 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 RNU6-512P-201ENST00000364438 103 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 RNY4P28-201ENST00000365281 93 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 SDHCP2-201ENST00000398565 501 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 AL158156.1-201ENST00000422509 473 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.05□□□□□ -1.6
ATP4AP20648 AC034236.1-201ENST00000469891 373 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 RPL23AP45-201ENST00000476406 468 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 RPL7P47-201ENST00000497299 556 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.05□□□□□ -1.6
ATP4AP20648 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.05□□□□□ -1.6
ATP4AP20648 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.05□□□□□ -1.6
ATP4AP20648 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 MIR4697-201ENST00000582977 78 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 AL162424.1-201ENST00000602325 221 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 AC008121.1-201ENST00000603244 268 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 MIR6891-201ENST00000618788 93 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 AP005019.3-201ENST00000620418 560 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 AC011944.2-201ENST00000624440 683 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.05□□□□□ -1.6
ATP4AP20648 SDAD1P2-201ENST00000441308 2028 ntBASIC5.05□□□□□ -1.6
ATP4AP20648 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.05□□□□□ -1.6
ATP4AP20648 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ATP4AP20648 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
ATP4AP20648 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
ATP4AP20648 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP4AP20648 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATP4AP20648 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.04□□□□□ -1.6
ATP4AP20648 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATP4AP20648 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.04□□□□□ -1.6
ATP4AP20648 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATP4AP20648 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
ATP4AP20648 AC025031.4-201ENST00000621248 3271 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.04□□□□□ -1.6
ATP4AP20648 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATP4AP20648 RNU6-384P-201ENST00000364900 104 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATP4AP20648 AL358472.1-201ENST00000431295 329 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.04□□□□□ -1.6
ATP4AP20648 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.04□□□□□ -1.6
ATP4AP20648 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATP4AP20648 AL590399.6-201ENST00000446396 307 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 HSPE1P25-201ENST00000455484 251 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 RPL21P104-201ENST00000464143 478 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 RNA5SP471-201ENST00000516971 106 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.04□□□□□ -1.6
ATP4AP20648 AC084851.1-201ENST00000529105 249 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.04□□□□□ -1.6
ATP4AP20648 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.04□□□□□ -1.6
ATP4AP20648 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.04□□□□□ -1.6
ATP4AP20648 AC023824.2-201ENST00000566185 400 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 AC090617.3-201ENST00000573670 475 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 MIR4659A-201ENST00000580269 81 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 SRGNP1-201ENST00000603392 451 ntBASIC5.04□□□□□ -1.6
ATP4AP20648 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATP4AP20648 AL161629.2-201ENST00000615347 275 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms