Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.8□□□□□ -1.64
RARAP10276 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.8□□□□□ -1.64
RARAP10276 TOMM20P4-201ENST00000427861 435 ntBASIC4.8□□□□□ -1.64
RARAP10276 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.8□□□□□ -1.64
RARAP10276 AL627311.1-201ENST00000431514 115 ntBASIC4.8□□□□□ -1.64
RARAP10276 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.8□□□□□ -1.64
RARAP10276 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.8□□□□□ -1.64
RARAP10276 ANXA2P1-201ENST00000505539 926 ntBASIC4.8□□□□□ -1.64
RARAP10276 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.8□□□□□ -1.64
RARAP10276 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.8□□□□□ -1.64
RARAP10276 RNU6-496P-201ENST00000516145 99 ntBASIC4.8□□□□□ -1.64
RARAP10276 Y_RNA.683-201ENST00000516508 93 ntBASIC4.8□□□□□ -1.64
RARAP10276 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.8□□□□□ -1.64
RARAP10276 AC025755.1-201ENST00000521306 278 ntBASIC4.8□□□□□ -1.64
RARAP10276 AC024405.2-202ENST00000532731 184 ntBASIC4.8□□□□□ -1.64
RARAP10276 AC005476.1-201ENST00000554427 397 ntBASIC4.8□□□□□ -1.64
RARAP10276 AC091042.1-201ENST00000579213 173 ntBASIC4.8□□□□□ -1.64
RARAP10276 AC023575.1-201ENST00000580510 358 ntBASIC4.8□□□□□ -1.64
RARAP10276 AL139395.1-201ENST00000603662 160 ntBASIC4.8□□□□□ -1.64
RARAP10276 MIR7154-201ENST00000620673 73 ntBASIC4.8□□□□□ -1.64
RARAP10276 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.8□□□□□ -1.64
RARAP10276 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RARAP10276 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RARAP10276 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RARAP10276 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.8□□□□□ -1.64
RARAP10276 AC007785.2-201ENST00000598627 1916 ntBASIC4.8□□□□□ -1.64
RARAP10276 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RARAP10276 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.79□□□□□ -1.64
RARAP10276 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RARAP10276 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.79□□□□□ -1.64
RARAP10276 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.79□□□□□ -1.64
RARAP10276 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RARAP10276 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RARAP10276 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RARAP10276 RNU6-227P-201ENST00000362865 103 ntBASIC4.79□□□□□ -1.64
RARAP10276 RNU6-682P-201ENST00000363843 106 ntBASIC4.79□□□□□ -1.64
RARAP10276 RNU6-102P-201ENST00000384485 104 ntBASIC4.79□□□□□ -1.64
RARAP10276 MIR10A-201ENST00000385043 110 ntBASIC4.79□□□□□ -1.64
RARAP10276 RNU6-1140P-201ENST00000410517 106 ntBASIC4.79□□□□□ -1.64
RARAP10276 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.79□□□□□ -1.64
RARAP10276 OR4C10P-201ENST00000434991 931 ntBASIC4.79□□□□□ -1.64
RARAP10276 PIGFP3-201ENST00000441918 722 ntBASIC4.79□□□□□ -1.64
RARAP10276 NDUFB4P10-201ENST00000452541 359 ntBASIC4.79□□□□□ -1.64
RARAP10276 SCARNA10-201ENST00000459255 330 ntBASIC4.79□□□□□ -1.64
RARAP10276 AC010469.1-201ENST00000463864 576 ntBASIC4.79□□□□□ -1.64
RARAP10276 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.79□□□□□ -1.64
RARAP10276 RN7SL41P-201ENST00000476144 297 ntBASIC4.79□□□□□ -1.64
RARAP10276 RN7SL826P-201ENST00000479724 288 ntBASIC4.79□□□□□ -1.64
RARAP10276 RNU7-175P-201ENST00000515915 61 ntBASIC4.79□□□□□ -1.64
RARAP10276 RNU6-1012P-201ENST00000516606 109 ntBASIC4.79□□□□□ -1.64
RARAP10276 AF186190.1-201ENST00000517470 480 ntBASIC4.79□□□□□ -1.64
RARAP10276 AC087441.2-201ENST00000529141 262 ntBASIC4.79□□□□□ -1.64
RARAP10276 SNORD84-203ENST00000584275 78 ntBASIC4.79□□□□□ -1.64
RARAP10276 AC091178.1-203ENST00000584586 279 ntBASIC4.79□□□□□ -1.64
RARAP10276 AL713866.2-201ENST00000603579 219 ntBASIC4.79□□□□□ -1.64
RARAP10276 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.79□□□□□ -1.64
RARAP10276 AC015813.4-201ENST00000610469 179 ntBASIC4.79□□□□□ -1.64
RARAP10276 U3.53-201ENST00000628922 216 ntBASIC4.79□□□□□ -1.64
RARAP10276 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.79□□□□□ -1.64
RARAP10276 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.79□□□□□ -1.64
RARAP10276 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.79□□□□□ -1.64
RARAP10276 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RARAP10276 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.79□□□□□ -1.64
RARAP10276 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RARAP10276 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RARAP10276 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.79□□□□□ -1.64
RARAP10276 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.78□□□□□ -1.64
RARAP10276 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RARAP10276 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RARAP10276 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RARAP10276 Y_RNA.76-201ENST00000362931 109 ntBASIC4.78□□□□□ -1.64
RARAP10276 Y_RNA.123-201ENST00000363338 102 ntBASIC4.78□□□□□ -1.64
RARAP10276 RNA5SP240-201ENST00000365355 128 ntBASIC4.78□□□□□ -1.64
RARAP10276 RNU6-937P-201ENST00000384325 106 ntBASIC4.78□□□□□ -1.64
RARAP10276 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.78□□□□□ -1.64
RARAP10276 RPL23AP65-201ENST00000475608 468 ntBASIC4.78□□□□□ -1.64
RARAP10276 IGLV2-34-201ENST00000490007 283 ntBASIC4.78□□□□□ -1.64
RARAP10276 AC108022.1-201ENST00000493466 478 ntBASIC4.78□□□□□ -1.64
RARAP10276 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.78□□□□□ -1.64
RARAP10276 AC104164.2-201ENST00000496953 495 ntBASIC4.78□□□□□ -1.64
RARAP10276 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.78□□□□□ -1.64
RARAP10276 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.78□□□□□ -1.64
RARAP10276 AC023824.2-201ENST00000566185 400 ntBASIC4.78□□□□□ -1.64
RARAP10276 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.78□□□□□ -1.64
RARAP10276 MTND6P33-201ENST00000571794 183 ntBASIC4.78□□□□□ -1.64
RARAP10276 FAM25E-202ENST00000608562 189 ntBASIC4.78□□□□□ -1.64
RARAP10276 AC090617.7-201ENST00000623952 126 ntBASIC4.78□□□□□ -1.64
RARAP10276 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RARAP10276 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
RARAP10276 AC090971.4-201ENST00000560291 1800 ntBASIC4.78□□□□□ -1.64
RARAP10276 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RARAP10276 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RARAP10276 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.77□□□□□ -1.65
RARAP10276 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RARAP10276 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RARAP10276 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.77□□□□□ -1.65
RARAP10276 MAPK10-263ENST00000641052 4307 ntBASIC4.77□□□□□ -1.65
RARAP10276 MAPK10-320ENST00000641462 6696 ntBASIC4.77□□□□□ -1.65
RARAP10276 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.77□□□□□ -1.65
RARAP10276 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms