Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHGBP05060 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CHGBP05060 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHGBP05060 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.27□□□□□ -1.73
CHGBP05060 MIR208A-201ENST00000362287 71 ntBASIC4.27□□□□□ -1.73
CHGBP05060 RNU4-35P-201ENST00000362588 141 ntBASIC4.27□□□□□ -1.73
CHGBP05060 Y_RNA.135-201ENST00000363439 95 ntBASIC4.27□□□□□ -1.73
CHGBP05060 MIR200C-201ENST00000384980 68 ntBASIC4.27□□□□□ -1.73
CHGBP05060 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CHGBP05060 SNORD17-201ENST00000390930 237 ntBASIC4.27□□□□□ -1.73
CHGBP05060 RPS4XP7-201ENST00000406274 780 ntBASIC4.27□□□□□ -1.73
CHGBP05060 RNU6-954P-201ENST00000411355 107 ntBASIC4.27□□□□□ -1.73
CHGBP05060 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.27□□□□□ -1.73
CHGBP05060 AC092809.3-201ENST00000415453 231 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AL590632.1-201ENST00000424289 371 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.27□□□□□ -1.73
CHGBP05060 RPL21P112-201ENST00000434403 463 ntBASIC4.27□□□□□ -1.73
CHGBP05060 MTCO3P45-201ENST00000443036 613 ntBASIC4.27□□□□□ -1.73
CHGBP05060 SNRPGP5-201ENST00000456003 220 ntBASIC4.27□□□□□ -1.73
CHGBP05060 snoU109.4-201ENST00000458953 143 ntBASIC4.27□□□□□ -1.73
CHGBP05060 RN7SL293P-201ENST00000481765 281 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AC078817.1-201ENST00000492623 435 ntBASIC4.27□□□□□ -1.73
CHGBP05060 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.27□□□□□ -1.73
CHGBP05060 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHGBP05060 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.27□□□□□ -1.73
CHGBP05060 Y_RNA.689-201ENST00000516589 107 ntBASIC4.27□□□□□ -1.73
CHGBP05060 RNU6-685P-201ENST00000517088 95 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AP003122.3-201ENST00000526316 255 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.27□□□□□ -1.73
CHGBP05060 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.27□□□□□ -1.73
CHGBP05060 MIR4503-201ENST00000582187 83 ntBASIC4.27□□□□□ -1.73
CHGBP05060 BNIP3P16-201ENST00000589779 534 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AL669831.4-202ENST00000590817 238 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AC012669.1-201ENST00000603209 283 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AC006254.3-201ENST00000603353 884 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AC069200.1-201ENST00000609511 323 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AC009570.1-201ENST00000609599 745 ntBASIC4.27□□□□□ -1.73
CHGBP05060 FAM157A-202ENST00000615155 405 ntBASIC4.27□□□□□ -1.73
CHGBP05060 AC007485.1-201ENST00000616755 206 ntBASIC4.27□□□□□ -1.73
CHGBP05060 PISRT1.1-201ENST00000616930 107 ntBASIC4.27□□□□□ -1.73
CHGBP05060 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CHGBP05060 AC243312.2-201ENST00000623340 601 ntBASIC4.27□□□□□ -1.73
CHGBP05060 U6.105-201ENST00000637379 88 ntBASIC4.27□□□□□ -1.73
CHGBP05060 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHGBP05060 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
CHGBP05060 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CHGBP05060 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHGBP05060 KPNA2P1-201ENST00000458289 1591 ntBASIC4.27□□□□□ -1.73
CHGBP05060 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CHGBP05060 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHGBP05060 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHGBP05060 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.26□□□□□ -1.73
CHGBP05060 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHGBP05060 Y_RNA.112-201ENST00000363250 102 ntBASIC4.26□□□□□ -1.73
CHGBP05060 RNU6-890P-201ENST00000384121 107 ntBASIC4.26□□□□□ -1.73
CHGBP05060 RNU6-393P-201ENST00000384475 107 ntBASIC4.26□□□□□ -1.73
CHGBP05060 MIR135A2-201ENST00000384854 100 ntBASIC4.26□□□□□ -1.73
CHGBP05060 MIR183-201ENST00000384958 110 ntBASIC4.26□□□□□ -1.73
CHGBP05060 SNORA16.2-201ENST00000390991 127 ntBASIC4.26□□□□□ -1.73
CHGBP05060 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.26□□□□□ -1.73
CHGBP05060 AL138878.1-201ENST00000405131 347 ntBASIC4.26□□□□□ -1.73
CHGBP05060 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.26□□□□□ -1.73
CHGBP05060 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.26□□□□□ -1.73
CHGBP05060 SSXP9-201ENST00000417503 292 ntBASIC4.26□□□□□ -1.73
CHGBP05060 YME1L1P1-201ENST00000429435 297 ntBASIC4.26□□□□□ -1.73
CHGBP05060 AL035666.1-201ENST00000446195 348 ntBASIC4.26□□□□□ -1.73
CHGBP05060 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.26□□□□□ -1.73
CHGBP05060 BTF3P15-201ENST00000455606 336 ntBASIC4.26□□□□□ -1.73
CHGBP05060 TRBV1-201ENST00000476502 284 ntBASIC4.26□□□□□ -1.73
CHGBP05060 AL135752.1-201ENST00000479477 471 ntBASIC4.26□□□□□ -1.73
CHGBP05060 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.26□□□□□ -1.73
CHGBP05060 RNU6-323P-201ENST00000521915 107 ntBASIC4.26□□□□□ -1.73
CHGBP05060 AP003385.6-201ENST00000531603 374 ntBASIC4.26□□□□□ -1.73
CHGBP05060 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.26□□□□□ -1.73
CHGBP05060 AC008269.2-201ENST00000561915 1105 ntBASIC4.26□□□□□ -1.73
CHGBP05060 AC010653.1-201ENST00000571108 881 ntBASIC4.26□□□□□ -1.73
CHGBP05060 MIR4680-201ENST00000580906 66 ntBASIC4.26□□□□□ -1.73
CHGBP05060 MIR5692C1-201ENST00000585309 91 ntBASIC4.26□□□□□ -1.73
CHGBP05060 AC073539.2-201ENST00000597113 165 ntBASIC4.26□□□□□ -1.73
CHGBP05060 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHGBP05060 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.26□□□□□ -1.73
CHGBP05060 AL732372.2-225ENST00000642124 456 ntBASIC4.26□□□□□ -1.73
CHGBP05060 CDC27P3-201ENST00000635418 1910 ntBASIC4.26□□□□□ -1.73
CHGBP05060 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHGBP05060 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHGBP05060 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHGBP05060 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CHGBP05060 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.26□□□□□ -1.73
CHGBP05060 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHGBP05060 Y_RNA.5-201ENST00000362334 102 ntBASIC4.25□□□□□ -1.73
CHGBP05060 RNU6-715P-201ENST00000365204 103 ntBASIC4.25□□□□□ -1.73
CHGBP05060 RNU6-1040P-201ENST00000383974 107 ntBASIC4.25□□□□□ -1.73
CHGBP05060 SNORA75B-201ENST00000384053 137 ntBASIC4.25□□□□□ -1.73
CHGBP05060 RNU6-505P-201ENST00000384427 107 ntBASIC4.25□□□□□ -1.73
CHGBP05060 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.25□□□□□ -1.73
CHGBP05060 RNA5SP56-201ENST00000410277 118 ntBASIC4.25□□□□□ -1.73
CHGBP05060 CYP4F29P-201ENST00000420685 446 ntBASIC4.25□□□□□ -1.73
CHGBP05060 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.25□□□□□ -1.73
CHGBP05060 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.25□□□□□ -1.73
CHGBP05060 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms