Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RPL7L1P1-201ENST00000448259 785 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 RPS15AP1-201ENST00000457423 391 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 GMFBP1-201ENST00000467831 427 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AC006512.1-201ENST00000468816 291 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AC012181.1-201ENST00000479895 423 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.77□□□□□ -1.81
COL3A1P02461 CCDC34P1-201ENST00000507441 517 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.77□□□□□ -1.81
COL3A1P02461 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.77□□□□□ -1.81
COL3A1P02461 RNU4-29P-201ENST00000515943 174 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AC107934.1-201ENST00000522215 217 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.77□□□□□ -1.81
COL3A1P02461 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.77□□□□□ -1.81
COL3A1P02461 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL3A1P02461 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.77□□□□□ -1.81
COL3A1P02461 MIR4319-201ENST00000577285 85 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 SNORD39.3-201ENST00000584451 71 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 APOOP1-201ENST00000604695 592 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.77□□□□□ -1.81
COL3A1P02461 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.77□□□□□ -1.81
COL3A1P02461 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL3A1P02461 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL3A1P02461 AC022031.1-201ENST00000585985 2593 ntBASIC3.77□□□□□ -1.81
COL3A1P02461 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL3A1P02461 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.77□□□□□ -1.81
COL3A1P02461 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL3A1P02461 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.76□□□□□ -1.81
COL3A1P02461 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.76□□□□□ -1.81
COL3A1P02461 Y_RNA.31-201ENST00000362574 102 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 RNU1-35P-201ENST00000362782 153 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 RNU6-853P-201ENST00000364306 107 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 Y_RNA.301-201ENST00000364990 103 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL3A1P02461 DHFRP6-201ENST00000401776 268 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 RPL31P52-201ENST00000407532 367 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 MIR1302-3-201ENST00000408128 138 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 PMCHL1-202ENST00000423102 261 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 AC007283.2-201ENST00000424739 197 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 CBX3P6-201ENST00000430257 527 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 MTCYBP9-201ENST00000431021 303 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.76□□□□□ -1.81
COL3A1P02461 RPL23AP74-201ENST00000437246 471 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.76□□□□□ -1.81
COL3A1P02461 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.76□□□□□ -1.81
COL3A1P02461 AL135752.1-201ENST00000479477 471 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 AC093303.1-201ENST00000514549 295 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 SMURF2P1-201ENST00000514992 481 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 MTCO2P24-201ENST00000515611 426 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 AC022634.1-201ENST00000520765 532 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 AP003122.3-201ENST00000526316 255 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 AC135001.1-201ENST00000544546 283 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 AL163153.1-201ENST00000554223 283 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.76□□□□□ -1.81
COL3A1P02461 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.76□□□□□ -1.81
COL3A1P02461 U4.1-201ENST00000620349 87 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 MTND5P33-201ENST00000571250 1450 ntBASIC3.76□□□□□ -1.81
COL3A1P02461 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.76□□□□□ -1.81
COL3A1P02461 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.75□□□□□ -1.81
COL3A1P02461 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL3A1P02461 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL3A1P02461 AL161781.1-201ENST00000354277 403 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 RNU4-66P-201ENST00000365199 138 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 RNU4-48P-201ENST00000365559 182 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
COL3A1P02461 RNA5SP21-201ENST00000410917 96 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 RNU6-847P-201ENST00000411115 108 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 AL133384.1-201ENST00000412744 351 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
COL3A1P02461 AL591212.2-201ENST00000433923 257 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 SETP5-201ENST00000437270 562 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 AC073415.1-201ENST00000449240 153 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 AC108938.1-201ENST00000451204 136 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.75□□□□□ -1.81
COL3A1P02461 MTCO3P2-201ENST00000457365 171 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 VN1R17P-201ENST00000472048 1090 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 RPL21P99-201ENST00000480369 423 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 RPL23AP41-201ENST00000484754 458 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 VN1R104P-201ENST00000505115 1009 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 FAM206BP-201ENST00000510179 541 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 RNA5SP367-201ENST00000516557 118 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.75□□□□□ -1.81
COL3A1P02461 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.75□□□□□ -1.81
COL3A1P02461 BDH2P1-201ENST00000602288 736 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 BMS1P21-201ENST00000634565 365 ntBASIC3.75□□□□□ -1.81
COL3A1P02461 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.75□□□□□ -1.81
COL3A1P02461 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL3A1P02461 AC005183.1-201ENST00000603687 1979 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 AP001350.1-201ENST00000601906 1524 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 RNU6-984P-201ENST00000363236 109 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 Y_RNA.193-201ENST00000363979 102 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL3A1P02461 RNU6-444P-201ENST00000383988 108 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 MIR181B1-201ENST00000385240 110 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 RNU6-193P-201ENST00000410977 107 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 AC074085.1-201ENST00000413598 418 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.74□□□□□ -1.81
COL3A1P02461 AL451074.5-201ENST00000415894 435 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 ARL5AP1-201ENST00000418991 388 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 RPS15AP12-201ENST00000419498 388 ntBASIC3.74□□□□□ -1.81
COL3A1P02461 OOSP1P1-201ENST00000423265 274 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms