Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MIR2276-201ENST00000516886 89 ntBASIC3.15□□□□□ -1.91
LDB3O75112 RNU6-1092P-201ENST00000516955 87 ntBASIC3.15□□□□□ -1.91
LDB3O75112 RNU6-1231P-201ENST00000517185 103 ntBASIC3.15□□□□□ -1.91
LDB3O75112 RPL7P20-201ENST00000520308 745 ntBASIC3.15□□□□□ -1.91
LDB3O75112 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB3O75112 PSMA3P-201ENST00000555485 635 ntBASIC3.15□□□□□ -1.91
LDB3O75112 NCAPGP2-201ENST00000557911 754 ntBASIC3.15□□□□□ -1.91
LDB3O75112 AC020661.2-201ENST00000560114 134 ntBASIC3.15□□□□□ -1.91
LDB3O75112 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB3O75112 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB3O75112 AC024619.4-201ENST00000580924 316 ntBASIC3.15□□□□□ -1.91
LDB3O75112 MIR4276-201ENST00000584832 70 ntBASIC3.15□□□□□ -1.91
LDB3O75112 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB3O75112 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB3O75112 AC106900.2-201ENST00000604994 317 ntBASIC3.15□□□□□ -1.91
LDB3O75112 Y_RNA.812-201ENST00000610788 101 ntBASIC3.15□□□□□ -1.91
LDB3O75112 AL390240.1-201ENST00000612950 384 ntBASIC3.15□□□□□ -1.91
LDB3O75112 Y_RNA.784-201ENST00000613803 101 ntBASIC3.15□□□□□ -1.91
LDB3O75112 SDR42E1P2-201ENST00000614861 481 ntBASIC3.15□□□□□ -1.91
LDB3O75112 Y_RNA.787-201ENST00000616522 101 ntBASIC3.15□□□□□ -1.91
LDB3O75112 Y_RNA.780-201ENST00000617336 101 ntBASIC3.15□□□□□ -1.91
LDB3O75112 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.15□□□□□ -1.91
LDB3O75112 Y_RNA.801-201ENST00000619005 101 ntBASIC3.15□□□□□ -1.91
LDB3O75112 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB3O75112 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LDB3O75112 SDAD1P2-201ENST00000441308 2028 ntBASIC3.15□□□□□ -1.91
LDB3O75112 AL356274.2-201ENST00000624379 3752 ntBASIC3.15□□□□□ -1.91
LDB3O75112 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
LDB3O75112 AL137003.2-201ENST00000606924 2538 ntBASIC3.15□□□□□ -1.91
LDB3O75112 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDB3O75112 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDB3O75112 MTND4P14-201ENST00000435799 1354 ntBASIC3.14□□□□□ -1.91
LDB3O75112 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LDB3O75112 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDB3O75112 Y_RNA.216-201ENST00000364205 93 ntBASIC3.14□□□□□ -1.91
LDB3O75112 RNU1-33P-201ENST00000364249 162 ntBASIC3.14□□□□□ -1.91
LDB3O75112 RNU6-641P-201ENST00000384006 107 ntBASIC3.14□□□□□ -1.91
LDB3O75112 RNU6-1029P-201ENST00000384109 107 ntBASIC3.14□□□□□ -1.91
LDB3O75112 SNORA36C-201ENST00000384289 132 ntBASIC3.14□□□□□ -1.91
LDB3O75112 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDB3O75112 RNU6-193P-201ENST00000410977 107 ntBASIC3.14□□□□□ -1.91
LDB3O75112 RNU6-1304P-201ENST00000411374 106 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB3O75112 ERLEC1P1-201ENST00000433806 578 ntBASIC3.14□□□□□ -1.91
LDB3O75112 RPL36AP6-201ENST00000435770 321 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB3O75112 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB3O75112 PRPS1P1-201ENST00000445305 876 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AC020550.1-201ENST00000447385 163 ntBASIC3.14□□□□□ -1.91
LDB3O75112 GAPDHP27-201ENST00000447427 1020 ntBASIC3.14□□□□□ -1.91
LDB3O75112 MTND1P18-201ENST00000448191 573 ntBASIC3.14□□□□□ -1.91
LDB3O75112 RNU7-66P-201ENST00000459469 62 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AC010401.1-201ENST00000463867 348 ntBASIC3.14□□□□□ -1.91
LDB3O75112 HSPE1P6-201ENST00000479457 291 ntBASIC3.14□□□□□ -1.91
LDB3O75112 RPL21P99-201ENST00000480369 423 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AC096576.1-201ENST00000489014 359 ntBASIC3.14□□□□□ -1.91
LDB3O75112 RPL7P47-201ENST00000497299 556 ntBASIC3.14□□□□□ -1.91
LDB3O75112 CCDC34P1-201ENST00000507441 517 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB3O75112 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB3O75112 AP001804.3-201ENST00000525146 880 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB3O75112 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB3O75112 RPL23AP84-201ENST00000571193 464 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB3O75112 MIR4424-201ENST00000585257 86 ntBASIC3.14□□□□□ -1.91
LDB3O75112 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AP002826.1-201ENST00000608835 315 ntBASIC3.14□□□□□ -1.91
LDB3O75112 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB3O75112 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB3O75112 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB3O75112 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB3O75112 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDB3O75112 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LDB3O75112 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LDB3O75112 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.13□□□□□ -1.91
LDB3O75112 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
LDB3O75112 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB3O75112 AL136164.4-201ENST00000625013 2135 ntBASIC3.13□□□□□ -1.91
LDB3O75112 RNU5A-1-201ENST00000362698 116 ntBASIC3.13□□□□□ -1.91
LDB3O75112 RNU4-66P-201ENST00000365199 138 ntBASIC3.13□□□□□ -1.91
LDB3O75112 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LDB3O75112 SNORD37.1-201ENST00000390968 65 ntBASIC3.13□□□□□ -1.91
LDB3O75112 SNORA75.4-201ENST00000391278 119 ntBASIC3.13□□□□□ -1.91
LDB3O75112 MTND2P23-201ENST00000422990 651 ntBASIC3.13□□□□□ -1.91
LDB3O75112 RPL27AP8-201ENST00000424277 446 ntBASIC3.13□□□□□ -1.91
LDB3O75112 UBE2D3P2-201ENST00000424409 445 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB3O75112 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB3O75112 AC005019.1-201ENST00000436455 431 ntBASIC3.13□□□□□ -1.91
LDB3O75112 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB3O75112 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.13□□□□□ -1.91
LDB3O75112 PPP1R2P5-201ENST00000457256 603 ntBASIC3.13□□□□□ -1.91
LDB3O75112 RNU7-180P-201ENST00000459240 63 ntBASIC3.13□□□□□ -1.91
LDB3O75112 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.13□□□□□ -1.91
LDB3O75112 AC116562.3-201ENST00000506136 177 ntBASIC3.13□□□□□ -1.91
LDB3O75112 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB3O75112 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB3O75112 AC105417.1-201ENST00000514691 285 ntBASIC3.13□□□□□ -1.91
LDB3O75112 SNORA70.16-201ENST00000516390 95 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms