Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MIR3921-201ENST00000577308 85 ntBASIC3.25□□□□□ -1.89
LDB2O43679 MIR2682-201ENST00000580305 110 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB2O43679 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB2O43679 DPPA3P3-201ENST00000603842 430 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AP001330.4-201ENST00000604350 154 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AL160281.1-201ENST00000605307 311 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU6-89P-201ENST00000606519 100 ntBASIC3.25□□□□□ -1.89
LDB2O43679 U1.23-201ENST00000610293 146 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AL157817.1-201ENST00000614264 790 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU1-68P-201ENST00000615382 146 ntBASIC3.25□□□□□ -1.89
LDB2O43679 uc_338.34-201ENST00000617467 174 ntBASIC3.25□□□□□ -1.89
LDB2O43679 U1.39-201ENST00000621562 146 ntBASIC3.25□□□□□ -1.89
LDB2O43679 MIR3651-201ENST00000630427 90 ntBASIC3.25□□□□□ -1.89
LDB2O43679 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LDB2O43679 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.25□□□□□ -1.89
LDB2O43679 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LDB2O43679 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDB2O43679 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDB2O43679 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
LDB2O43679 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.24□□□□□ -1.89
LDB2O43679 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDB2O43679 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB2O43679 SNORA38.1-201ENST00000364172 131 ntBASIC3.24□□□□□ -1.89
LDB2O43679 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB2O43679 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AL513331.1-201ENST00000411908 397 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.24□□□□□ -1.89
LDB2O43679 ARL5AP1-201ENST00000418991 388 ntBASIC3.24□□□□□ -1.89
LDB2O43679 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.24□□□□□ -1.89
LDB2O43679 RPL21P66-201ENST00000426566 466 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AC005300.1-201ENST00000428401 373 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AC005326.1-201ENST00000429197 123 ntBASIC3.24□□□□□ -1.89
LDB2O43679 MTND4LP16-201ENST00000440828 295 ntBASIC3.24□□□□□ -1.89
LDB2O43679 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB2O43679 AC115115.1-201ENST00000449927 248 ntBASIC3.24□□□□□ -1.89
LDB2O43679 MTND1P11-201ENST00000456661 876 ntBASIC3.24□□□□□ -1.89
LDB2O43679 RNU6-953P-201ENST00000459154 107 ntBASIC3.24□□□□□ -1.89
LDB2O43679 RPL21P99-201ENST00000480369 423 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB2O43679 RBBP4P6-201ENST00000508098 202 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB2O43679 RNU6-123P-201ENST00000516163 102 ntBASIC3.24□□□□□ -1.89
LDB2O43679 RNU6-927P-201ENST00000516199 100 ntBASIC3.24□□□□□ -1.89
LDB2O43679 RN7SKP57-201ENST00000517248 293 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.24□□□□□ -1.89
LDB2O43679 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB2O43679 AC023050.3-201ENST00000541142 333 ntBASIC3.24□□□□□ -1.89
LDB2O43679 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB2O43679 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB2O43679 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB2O43679 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB2O43679 AC005261.5-201ENST00000596280 355 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AC069234.5-201ENST00000611056 416 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AL390240.1-201ENST00000612950 384 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AL359547.2-201ENST00000615810 418 ntBASIC3.24□□□□□ -1.89
LDB2O43679 XIST_intron.1-201ENST00000619444 68 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB2O43679 AC090617.10-201ENST00000624308 134 ntBASIC3.24□□□□□ -1.89
LDB2O43679 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB2O43679 MTND5P42-201ENST00000637720 498 ntBASIC3.24□□□□□ -1.89
LDB2O43679 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB2O43679 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDB2O43679 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDB2O43679 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDB2O43679 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDB2O43679 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDB2O43679 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
LDB2O43679 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LDB2O43679 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LDB2O43679 RNU6-845P-201ENST00000362578 103 ntBASIC3.23□□□□□ -1.89
LDB2O43679 RNA5SP295-201ENST00000362655 121 ntBASIC3.23□□□□□ -1.89
LDB2O43679 MIR514A1-201ENST00000385133 98 ntBASIC3.23□□□□□ -1.89
LDB2O43679 RNU4-26P-201ENST00000410270 107 ntBASIC3.23□□□□□ -1.89
LDB2O43679 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDB2O43679 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.23□□□□□ -1.89
LDB2O43679 HMGB1P27-201ENST00000431429 603 ntBASIC3.23□□□□□ -1.89
LDB2O43679 TXNP1-201ENST00000441872 371 ntBASIC3.23□□□□□ -1.89
LDB2O43679 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB2O43679 Z75741.1-201ENST00000446793 314 ntBASIC3.23□□□□□ -1.89
LDB2O43679 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.23□□□□□ -1.89
LDB2O43679 ELOCP23-201ENST00000452014 332 ntBASIC3.23□□□□□ -1.89
LDB2O43679 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.23□□□□□ -1.89
LDB2O43679 HMGN2P16-201ENST00000456802 261 ntBASIC3.23□□□□□ -1.89
LDB2O43679 RN7SL807P-201ENST00000470923 297 ntBASIC3.23□□□□□ -1.89
LDB2O43679 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB2O43679 AL049874.1-201ENST00000489560 388 ntBASIC3.23□□□□□ -1.89
LDB2O43679 SNORA31.8-201ENST00000516327 108 ntBASIC3.23□□□□□ -1.89
LDB2O43679 SNORA64.4-201ENST00000516632 81 ntBASIC3.23□□□□□ -1.89
LDB2O43679 MTND4P7-201ENST00000523876 130 ntBASIC3.23□□□□□ -1.89
LDB2O43679 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB2O43679 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB2O43679 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB2O43679 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.23□□□□□ -1.89
LDB2O43679 SYF2P1-201ENST00000550658 413 ntBASIC3.23□□□□□ -1.89
LDB2O43679 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB2O43679 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB2O43679 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB2O43679 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB2O43679 AL136221.1-201ENST00000621449 509 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms