Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC105252.1-201ENST00000503089 286 ntBASIC2.91□□□□□ -1.94
O00370 AC138853.1-201ENST00000503549 823 ntBASIC2.91□□□□□ -1.94
O00370 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.91□□□□□ -1.94
O00370 SEM1P1-201ENST00000506694 209 ntBASIC2.91□□□□□ -1.94
O00370 RN7SKP132-201ENST00000516001 208 ntBASIC2.91□□□□□ -1.94
O00370 RNA5SP291-201ENST00000517222 105 ntBASIC2.91□□□□□ -1.94
O00370 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
O00370 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
O00370 AC087883.1-201ENST00000551882 391 ntBASIC2.91□□□□□ -1.94
O00370 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.91□□□□□ -1.94
O00370 AC245014.2-201ENST00000603689 287 ntBASIC2.91□□□□□ -1.94
O00370 AC091805.2-201ENST00000603848 235 ntBASIC2.91□□□□□ -1.94
O00370 Z84480.1-201ENST00000605131 311 ntBASIC2.91□□□□□ -1.94
O00370 AC246785.4-201ENST00000605374 287 ntBASIC2.91□□□□□ -1.94
O00370 AL451064.1-201ENST00000607718 471 ntBASIC2.91□□□□□ -1.94
O00370 AC104073.3-201ENST00000610942 955 ntBASIC2.91□□□□□ -1.94
O00370 AC139792.2-201ENST00000624218 587 ntBASIC2.91□□□□□ -1.94
O00370 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
O00370 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.91□□□□□ -1.94
O00370 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
O00370 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
O00370 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
O00370 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
O00370 RNA5SP21-201ENST00000410917 96 ntBASIC2.9□□□□□ -1.95
O00370 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.9□□□□□ -1.95
O00370 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.9□□□□□ -1.95
O00370 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.9□□□□□ -1.95
O00370 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.9□□□□□ -1.95
O00370 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.9□□□□□ -1.95
O00370 USP9YP14-201ENST00000430663 563 ntBASIC2.9□□□□□ -1.95
O00370 AC025750.2-201ENST00000442609 450 ntBASIC2.9□□□□□ -1.95
O00370 MTCO2P18-201ENST00000457151 658 ntBASIC2.9□□□□□ -1.95
O00370 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.9□□□□□ -1.95
O00370 AC090525.1-201ENST00000479116 478 ntBASIC2.9□□□□□ -1.95
O00370 RPL23AP70-201ENST00000483361 460 ntBASIC2.9□□□□□ -1.95
O00370 AC098799.2-201ENST00000509466 868 ntBASIC2.9□□□□□ -1.95
O00370 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.9□□□□□ -1.95
O00370 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.9□□□□□ -1.95
O00370 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.9□□□□□ -1.95
O00370 RNU6-1092P-201ENST00000516955 87 ntBASIC2.9□□□□□ -1.95
O00370 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.9□□□□□ -1.95
O00370 AGGF1P4-201ENST00000568249 801 ntBASIC2.9□□□□□ -1.95
O00370 MIR3167-201ENST00000579623 85 ntBASIC2.9□□□□□ -1.95
O00370 AC103810.1-201ENST00000579873 453 ntBASIC2.9□□□□□ -1.95
O00370 AL355877.2-201ENST00000603670 358 ntBASIC2.9□□□□□ -1.95
O00370 AL670379.6-201ENST00000603753 252 ntBASIC2.9□□□□□ -1.95
O00370 AL670379.11-201ENST00000604059 253 ntBASIC2.9□□□□□ -1.95
O00370 AL161729.4-201ENST00000604650 476 ntBASIC2.9□□□□□ -1.95
O00370 AC008162.1-201ENST00000604718 254 ntBASIC2.9□□□□□ -1.95
O00370 AL670379.1-201ENST00000604752 252 ntBASIC2.9□□□□□ -1.95
O00370 AL670379.5-201ENST00000605253 252 ntBASIC2.9□□□□□ -1.95
O00370 AL670379.12-201ENST00000605291 253 ntBASIC2.9□□□□□ -1.95
O00370 AL670379.8-201ENST00000605353 252 ntBASIC2.9□□□□□ -1.95
O00370 AL670379.7-201ENST00000605823 252 ntBASIC2.9□□□□□ -1.95
O00370 HULC.1-201ENST00000612720 240 ntBASIC2.9□□□□□ -1.95
O00370 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
O00370 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.9□□□□□ -1.95
O00370 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.9□□□□□ -1.95
O00370 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.9□□□□□ -1.95
O00370 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
O00370 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.89□□□□□ -1.95
O00370 RNU6-741P-201ENST00000383889 107 ntBASIC2.89□□□□□ -1.95
O00370 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.89□□□□□ -1.95
O00370 AL360182.1-201ENST00000397433 468 ntBASIC2.89□□□□□ -1.95
O00370 RPL19P1-201ENST00000411635 428 ntBASIC2.89□□□□□ -1.95
O00370 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.89□□□□□ -1.95
O00370 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.89□□□□□ -1.95
O00370 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.89□□□□□ -1.95
O00370 AC104651.1-201ENST00000427559 735 ntBASIC2.89□□□□□ -1.95
O00370 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.89□□□□□ -1.95
O00370 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.89□□□□□ -1.95
O00370 AL714022.1-201ENST00000439897 151 ntBASIC2.89□□□□□ -1.95
O00370 AL136380.1-201ENST00000447970 162 ntBASIC2.89□□□□□ -1.95
O00370 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.89□□□□□ -1.95
O00370 AC079448.1-201ENST00000449377 373 ntBASIC2.89□□□□□ -1.95
O00370 AC013267.1-201ENST00000458227 267 ntBASIC2.89□□□□□ -1.95
O00370 RNU7-23P-201ENST00000459465 62 ntBASIC2.89□□□□□ -1.95
O00370 RPS3AP17-201ENST00000472594 777 ntBASIC2.89□□□□□ -1.95
O00370 RPS15AP34-201ENST00000487776 387 ntBASIC2.89□□□□□ -1.95
O00370 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.89□□□□□ -1.95
O00370 SCARNA24.1-201ENST00000516465 137 ntBASIC2.89□□□□□ -1.95
O00370 RNU6-405P-201ENST00000516637 110 ntBASIC2.89□□□□□ -1.95
O00370 RNA5SP290-201ENST00000517133 127 ntBASIC2.89□□□□□ -1.95
O00370 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.89□□□□□ -1.95
O00370 AP002963.1-201ENST00000530590 184 ntBASIC2.89□□□□□ -1.95
O00370 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.89□□□□□ -1.95
O00370 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.89□□□□□ -1.95
O00370 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.89□□□□□ -1.95
O00370 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.89□□□□□ -1.95
O00370 AC010546.1-201ENST00000569391 485 ntBASIC2.89□□□□□ -1.95
O00370 AL391840.1-201ENST00000571144 367 ntBASIC2.89□□□□□ -1.95
O00370 AC109347.2-201ENST00000610220 349 ntBASIC2.89□□□□□ -1.95
O00370 AC011939.3-201ENST00000613686 466 ntBASIC2.89□□□□□ -1.95
O00370 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.89□□□□□ -1.95
O00370 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.89□□□□□ -1.95
O00370 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.89□□□□□ -1.95
O00370 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
O00370 ZNF519P1-201ENST00000449011 1626 ntBASIC2.89□□□□□ -1.95
O00370 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
O00370 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms