Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.68□□□□□ -1.98
NPIPA3F8WFD2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
NPIPA3F8WFD2 AC008669.1-201ENST00000565823 2178 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 MIR148B-201ENST00000362252 99 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 SNORD21-201ENST00000383953 95 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 DEFB108C-201ENST00000400154 252 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 RPL26P27-201ENST00000414397 437 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 CDK8P2-201ENST00000415020 547 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 SAR1AP4-201ENST00000429225 591 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AL139132.1-201ENST00000431587 344 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC009296.1-201ENST00000443146 155 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 RPL37P4-201ENST00000448908 268 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC079448.1-201ENST00000449377 373 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC126389.1-201ENST00000477436 290 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC116562.3-201ENST00000506136 177 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC109927.2-201ENST00000506416 303 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 RPL23AP94-201ENST00000512518 302 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 RNU6-410P-201ENST00000517006 107 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 MTCYBP20-201ENST00000524239 1129 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC068587.5-201ENST00000528506 175 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC025281.1-201ENST00000567026 265 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC109347.2-201ENST00000610220 349 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC013562.2-201ENST00000611632 603 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC012409.4-201ENST00000612923 249 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC011939.3-201ENST00000613686 466 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AL359547.2-201ENST00000615810 418 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC009509.4-201ENST00000619202 509 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC007318.2-201ENST00000620999 243 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AC008264.2-201ENST00000610193 3731 ntBASIC2.67□□□□□ -1.98
NPIPA3F8WFD2 AP003122.5-201ENST00000527668 3766 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 NACAP2-201ENST00000318548 624 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC073325.2-201ENST00000339545 159 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 RNU6-181P-201ENST00000363225 107 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 RNU6-179P-201ENST00000363350 107 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 SNORA51.4-201ENST00000364993 124 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 RNU6-456P-201ENST00000384493 107 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AL365338.1-201ENST00000422282 858 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 RPL7P37-201ENST00000425095 738 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC133104.1-201ENST00000429100 218 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 RPS15AP27-201ENST00000449183 343 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC009901.1-201ENST00000506703 541 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 RBBP4P6-201ENST00000508098 202 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC091826.1-201ENST00000514065 313 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 RN7SKP43-201ENST00000516173 320 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 RNA5SP367-201ENST00000516557 118 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 RNU6-445P-201ENST00000516949 107 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC022634.1-201ENST00000520765 532 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC025755.1-201ENST00000521306 278 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AP003122.3-201ENST00000526316 255 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AP001646.1-201ENST00000527936 915 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC084851.1-201ENST00000529105 249 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 NACAP3-201ENST00000552100 481 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 GTF3AP2-201ENST00000557014 266 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AL391840.1-201ENST00000571144 367 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 MIR4513-201ENST00000581077 86 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC005498.1-201ENST00000592125 465 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AL355598.1-201ENST00000604169 202 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AL035413.2-201ENST00000604801 525 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AL139286.2-201ENST00000606838 396 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC091834.1-201ENST00000614543 472 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC009090.3-201ENST00000616553 565 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC099842.1-201ENST00000619919 596 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 AC025034.2-201ENST00000623264 286 ntBASIC2.66□□□□□ -1.98
NPIPA3F8WFD2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms