Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SNORA66-201ENST00000384792 133 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 RNU6-381P-201ENST00000391259 108 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 AURKAPS2-201ENST00000454983 333 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 Y_RNA.637-201ENST00000459424 114 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 RN7SL51P-201ENST00000468230 285 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.44□□□□□ -1.54
RCCD1A6NED2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.44□□□□□ -1.54
RCCD1A6NED2 RN7SKP122-201ENST00000515923 296 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 RN7SKP164-201ENST00000516138 266 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 AC100767.1-201ENST00000528178 123 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.44□□□□□ -1.54
RCCD1A6NED2 AC022616.8-201ENST00000533569 253 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 AC126177.5-201ENST00000549599 178 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 MTND5P35-201ENST00000557537 1720 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.44□□□□□ -1.54
RCCD1A6NED2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.44□□□□□ -1.54
RCCD1A6NED2 FO393422.1-201ENST00000603908 708 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 RN7SL787P-201ENST00000613000 284 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 AC006065.5-201ENST00000623427 349 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCCD1A6NED2 AC112198.2-201ENST00000426589 6996 ntBASIC5.44□□□□□ -1.54
RCCD1A6NED2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RCCD1A6NED2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RCCD1A6NED2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RCCD1A6NED2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCCD1A6NED2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCCD1A6NED2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RCCD1A6NED2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RCCD1A6NED2 SMG1P4-204ENST00000523028 4131 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RCCD1A6NED2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RCCD1A6NED2 SALL4P2-201ENST00000423288 2910 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RCCD1A6NED2 Z98749.2-208ENST00000381646 500 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 SNORA2.3-201ENST00000383920 135 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 RNU6-1056P-201ENST00000383996 107 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 SNORA20-201ENST00000384662 132 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 MIR518D-201ENST00000385014 87 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RCCD1A6NED2 RNU6-1199P-201ENST00000411249 104 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 COX6CP13-201ENST00000428703 226 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 RPS29P10-201ENST00000439197 166 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 RPL23AP14-201ENST00000468281 468 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 SNRPGP7-201ENST00000469016 106 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 MIR4744-201ENST00000581563 82 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 AC109309.2-201ENST00000612597 332 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 TUG1_4.1-201ENST00000619464 181 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 AC091932.3-201ENST00000624223 323 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 AL034408.1-202ENST00000636088 415 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.43□□□□□ -1.54
RCCD1A6NED2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.43□□□□□ -1.54
RCCD1A6NED2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RCCD1A6NED2 AC118273.1-201ENST00000525324 3006 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RCCD1A6NED2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.42□□□□□ -1.54
RCCD1A6NED2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RCCD1A6NED2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RCCD1A6NED2 SRP72P2-201ENST00000344851 1979 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
RCCD1A6NED2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RCCD1A6NED2 Y_RNA.43-201ENST00000362670 111 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 SNORD56.1-201ENST00000362913 68 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 RNU6-103P-201ENST00000363686 107 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 Y_RNA.179-201ENST00000363844 90 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 RN7SKP124-201ENST00000364730 341 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 RNU6-898P-201ENST00000365627 104 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 RNU2-54P-201ENST00000410299 190 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 RN7SKP293-201ENST00000411389 296 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 AC244098.2-201ENST00000422068 99 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 RPL23AP58-201ENST00000440453 469 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 AL450023.3-201ENST00000440592 271 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 AC079168.2-201ENST00000453977 416 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 RPS17P2-201ENST00000461663 408 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.42□□□□□ -1.54
RCCD1A6NED2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.42□□□□□ -1.54
RCCD1A6NED2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.42□□□□□ -1.54
RCCD1A6NED2 RN7SL435P-201ENST00000584418 282 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.42□□□□□ -1.54
RCCD1A6NED2 AC019159.1-201ENST00000605094 187 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 RNA5SP108-201ENST00000605921 117 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 MIR6768-201ENST00000610734 72 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 RNA5SP440-201ENST00000612665 119 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 AL512624.1-201ENST00000613638 469 ntBASIC5.42□□□□□ -1.54
RCCD1A6NED2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RCCD1A6NED2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RCCD1A6NED2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RCCD1A6NED2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms