Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 AC021739.1-201ENST00000559631 174 ntBASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 MIR3167-201ENST00000579623 85 ntBASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 AL355802.3-201ENST00000607571 545 ntBASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 AP005229.2-201ENST00000609980 697 ntBASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 AC024257.5-201ENST00000612739 531 ntBASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 AC092140.2-201ENST00000618027 521 ntBASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 AC104820.1-201ENST00000624183 307 ntBASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.7□□□□□ -2.3
TRAV13-2A0A0B4J235 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 RNU1-23P-201ENST00000363361 144 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 RNU6-271P-201ENST00000363858 105 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 RNU6-1187P-201ENST00000364771 110 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 SNORA70.7-201ENST00000384159 133 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 RNU6-77P-201ENST00000410554 91 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 TOMM20P4-201ENST00000427861 435 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 AL161651.1-201ENST00000440882 223 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 RPS29P29-201ENST00000456396 171 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 AC092902.1-201ENST00000486999 259 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 AL133373.1-201ENST00000497098 94 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 SNORA25.11-201ENST00000515935 105 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 ARL2BPP5-201ENST00000523141 481 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 CYCSP27-201ENST00000527643 293 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 AP003122.4-201ENST00000530980 758 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 AC125611.1-201ENST00000549563 229 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 ROCK1P1-201ENST00000573767 549 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 AC090079.2-201ENST00000575289 768 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 AP001542.2-201ENST00000593141 364 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 DUXAP11-201ENST00000603858 526 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 AL645939.4-201ENST00000604495 135 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 ELOCP5-201ENST00000604924 333 ntBASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV13-2A0A0B4J235 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 RNU6-778P-201ENST00000363269 103 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 MIR597-201ENST00000384968 97 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 CCDC58P2-201ENST00000417131 366 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 MTCYBP32-201ENST00000427945 1084 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC092634.2-201ENST00000428146 1010 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC005345.1-201ENST00000431868 217 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 RPL7P34-201ENST00000433316 712 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AL353691.1-201ENST00000451332 387 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 SNORD13-201ENST00000459299 104 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 RPS20P20-201ENST00000460498 340 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 RPL39P28-201ENST00000465655 155 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 RPL30P7-201ENST00000479312 323 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 RPL36AP21-201ENST00000490372 323 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 MTND4P2-201ENST00000507767 1203 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC116337.1-201ENST00000509680 687 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC117522.2-201ENST00000510049 657 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 SNORA48.9-201ENST00000516419 162 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 OR5B19P-201ENST00000531766 928 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 SULT1C2P1-202ENST00000562418 459 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AL713866.2-201ENST00000603579 219 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC069304.2-201ENST00000605154 435 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AF129408.1-201ENST00000608767 431 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 DUSP12P1-201ENST00000612874 516 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 AL121890.5-201ENST00000620848 304 ntBASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV13-2A0A0B4J235 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 SNORA11-201ENST00000408789 128 ntBASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 RNA5SP100-201ENST00000410903 110 ntBASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 RNA5SP59-201ENST00000410922 110 ntBASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AL135790.2-201ENST00000437701 267 ntBASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 GDI2P2-201ENST00000445131 608 ntBASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AC084024.2-201ENST00000503480 791 ntBASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 IGJP1-201ENST00000522682 475 ntBASIC0.67□□□□□ -2.3
TRAV13-2A0A0B4J235 AP005660.1-201ENST00000522972 293 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms