Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC133485.1-201ENST00000567176 124 ntBASIC1.22□□□□□ -2.21
SHANK2Q9UPX8 AC138907.6-201ENST00000568401 126 ntBASIC1.22□□□□□ -2.21
SHANK2Q9UPX8 AC135507.1-201ENST00000607214 561 ntBASIC1.22□□□□□ -2.21
SHANK2Q9UPX8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 NACAP2-201ENST00000318548 624 ntBASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 RNU6-374P-201ENST00000364146 108 ntBASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 Y_RNA.493-201ENST00000384422 102 ntBASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 MIR767-201ENST00000390228 109 ntBASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 RPS3AP24-201ENST00000407896 734 ntBASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 UBE2FP1-201ENST00000416536 447 ntBASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 AC112518.2-201ENST00000508565 425 ntBASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 AC007038.2-201ENST00000608095 740 ntBASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 TPTE2P4-201ENST00000258589 1605 ntBASIC1.21□□□□□ -2.22
SHANK2Q9UPX8 RNU6-1235P-201ENST00000384559 107 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 MIR147B-201ENST00000390185 80 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 AC098614.2-201ENST00000426040 255 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 AC000111.3-201ENST00000433478 193 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 RPL23AP6-201ENST00000446637 472 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 RNU6-498P-201ENST00000459468 107 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 AC087884.1-201ENST00000469738 328 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 OR52A4P-202ENST00000481634 799 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 MED28P6-201ENST00000558776 231 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 FAM60BP-201ENST00000578364 658 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 AC009541.1-201ENST00000438279 2662 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 AC007785.2-201ENST00000598627 1916 ntBASIC1.2□□□□□ -2.22
SHANK2Q9UPX8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 SFR1P2-201ENST00000421841 730 ntBASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 NDUFA5P10-201ENST00000432147 357 ntBASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 MTCYBP3-201ENST00000445588 1137 ntBASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 AC023141.11-201ENST00000508864 202 ntBASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 AC090888.1-201ENST00000561335 1141 ntBASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 MIR4529-201ENST00000578110 78 ntBASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 AP003399.1-201ENST00000637534 361 ntBASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 ZNF702P-202ENST00000434269 1966 ntBASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 AC008163.1-202ENST00000636004 2889 ntBASIC1.19□□□□□ -2.22
SHANK2Q9UPX8 Y_RNA.60-201ENST00000362831 98 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 RNU6-1074P-201ENST00000383995 104 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AL136372.1-201ENST00000403060 228 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AL356131.1-201ENST00000405826 414 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 RNU7-23P-201ENST00000459465 62 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AC018437.1-201ENST00000492214 406 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 MRPS36P2-201ENST00000512569 299 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AL049870.4-201ENST00000555741 486 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AL773524.1-201ENST00000614065 229 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 RNU6-19P-201ENST00000384718 107 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 PRRC2CP1-201ENST00000404428 159 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 RPL31P53-201ENST00000457065 348 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AC067942.3-201ENST00000512025 362 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 MIR4504-201ENST00000577413 92 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AC079791.1-201ENST00000605356 973 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 AC010329.5-201ENST00000623497 2174 ntBASIC1.18□□□□□ -2.22
SHANK2Q9UPX8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 RNU6-1197P-201ENST00000391183 107 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 MRPL35P3-201ENST00000421557 364 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 AL353689.1-201ENST00000438895 199 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 RNU6-420P-201ENST00000458780 107 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 AC111193.1-201ENST00000504097 155 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 AC093770.1-201ENST00000511559 571 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 RRN3P3-201ENST00000549207 578 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 AC006270.3-201ENST00000605967 1036 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 AP002826.1-201ENST00000608835 315 ntBASIC1.17□□□□□ -2.22
SHANK2Q9UPX8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 MTATP6P31-201ENST00000406985 692 ntBASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 RN7SKP158-201ENST00000410453 326 ntBASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 AC021146.2-201ENST00000504736 556 ntBASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 AP001960.1-201ENST00000506494 658 ntBASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 SNORA70.16-201ENST00000516390 95 ntBASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 AP006248.3-201ENST00000623580 594 ntBASIC1.16□□□□□ -2.22
SHANK2Q9UPX8 Y_RNA.280-201ENST00000364765 112 ntBASIC1.15□□□□□ -2.23
SHANK2Q9UPX8 Y_RNA.390-201ENST00000383932 102 ntBASIC1.15□□□□□ -2.23
SHANK2Q9UPX8 RNU6-16P-201ENST00000384385 107 ntBASIC1.15□□□□□ -2.23
SHANK2Q9UPX8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.15□□□□□ -2.23
SHANK2Q9UPX8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms