Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 CUL1P1-201ENST00000509510 2425 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 RPS4XP5-202ENST00000449995 1334 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 Y_RNA.231-201ENST00000364358 102 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL20A1Q9P218 AL356968.1-201ENST00000416622 474 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 AL160275.3-201ENST00000423876 471 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 AL158071.1-201ENST00000430315 461 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 GPM6BP2-201ENST00000432046 144 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 RPL36AP53-201ENST00000432891 316 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 GPM6BP1-201ENST00000446387 144 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 KC877373.1-201ENST00000479066 408 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 AC110794.1-201ENST00000505816 425 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 RNA5SP471-201ENST00000516971 106 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 MIR2682-201ENST00000580305 110 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 AL160281.1-201ENST00000605307 311 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 BNIP3P10-201ENST00000605360 577 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 AC006504.8-201ENST00000621046 635 ntBASIC3.72□□□□□ -1.81
COL20A1Q9P218 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL20A1Q9P218 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.72□□□□□ -1.81
COL20A1Q9P218 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL20A1Q9P218 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.71□□□□□ -1.81
COL20A1Q9P218 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.71□□□□□ -1.81
COL20A1Q9P218 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL20A1Q9P218 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC022336.2-201ENST00000568966 2538 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL20A1Q9P218 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL20A1Q9P218 Y_RNA.534-201ENST00000384599 112 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 MT-TL1-201ENST00000386347 75 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 SNORA48.5-201ENST00000391143 135 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 UBE2V1P2-201ENST00000397758 440 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AL592114.1-201ENST00000403842 483 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 FAT1P1-201ENST00000406588 507 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AL591034.1-201ENST00000407447 340 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC009237.5-201ENST00000414271 501 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC138393.2-201ENST00000414742 246 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC009161.1-201ENST00000417306 376 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 RPL30P16-201ENST00000419341 429 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 SRIP2-201ENST00000428470 166 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 ERLEC1P1-201ENST00000433806 578 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 RPL21P99-201ENST00000480369 423 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC018710.1-201ENST00000506509 158 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC025465.4-201ENST00000513422 638 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC107934.2-201ENST00000518653 310 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 SYF2P1-201ENST00000550658 413 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AL121579.1-201ENST00000555129 305 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 MIR4424-201ENST00000585257 86 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 AC009570.1-201ENST00000609599 745 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 RNVU1-4-201ENST00000612985 164 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 uc_338.32-201ENST00000615087 172 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AF117829.1-206ENST00000621883 3802 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 AL512643.1-201ENST00000635735 524 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 Z99571.1-201ENST00000636677 394 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL20A1Q9P218 AL049641.1-201ENST00000441055 1948 ntBASIC3.71□□□□□ -1.82
COL20A1Q9P218 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL20A1Q9P218 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL20A1Q9P218 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL20A1Q9P218 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
COL20A1Q9P218 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 AL359693.1-201ENST00000614959 2407 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 Y_RNA.390-201ENST00000383932 102 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 RNU6-38P-201ENST00000384085 107 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 RNY3P14-201ENST00000384309 102 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 MIR514A2-201ENST00000385131 88 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 MIR514A3-201ENST00000385132 88 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 AL356776.1-201ENST00000406574 447 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 RNU4-47P-201ENST00000410876 114 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 RPL23AP82-202ENST00000427528 469 ntBASIC3.7□□□□□ -1.82
COL20A1Q9P218 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.7□□□□□ -1.82
COL20A1Q9P218 AL592045.1-201ENST00000429867 352 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms