Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 RNU5A-8P-201ENST00000364102 114 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 SNORA70B-201ENST00000384210 135 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 RNU6-658P-201ENST00000384606 106 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 RNU6-278P-201ENST00000390945 109 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 RNU6-757P-201ENST00000410334 100 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 RPL30P4-201ENST00000429309 333 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 UBE2D3P1-201ENST00000436669 444 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 LARP1BP3-201ENST00000437229 869 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 LINC00888-204ENST00000487386 421 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AP000907.2-201ENST00000530827 353 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 MIR3167-201ENST00000579623 85 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC011458.1-201ENST00000604034 617 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC106052.1-201ENST00000608029 497 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC069294.1-201ENST00000608397 350 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 uc_338.14-201ENST00000613162 166 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 AC007490.1-201ENST00000624321 703 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KLHL28Q9NXS3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 MIR518C-201ENST00000384822 101 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 NDUFS5P1-201ENST00000405668 289 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 RN7SKP158-201ENST00000410453 326 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 MTCO2P8-201ENST00000412213 658 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 HMGB1P27-201ENST00000431429 603 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC084290.1-201ENST00000434995 374 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC124916.1-201ENST00000444020 547 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 PSPHP1-201ENST00000450062 261 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AL513124.1-201ENST00000450410 614 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 RPL23AP35-201ENST00000451906 501 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC108059.3-201ENST00000456388 214 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 RPL23AP41-201ENST00000484754 458 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC139453.3-201ENST00000493276 369 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 RN7SL636P-201ENST00000497504 294 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC008549.1-201ENST00000512900 643 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 MIR892C-201ENST00000516410 77 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC105185.1-201ENST00000518705 535 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AP004247.1-201ENST00000531556 1289 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC021269.2-201ENST00000532318 330 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AL138976.2-201ENST00000563989 694 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 MIR4765-201ENST00000585007 77 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC104984.5-201ENST00000586878 94 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 BNIP3P23-201ENST00000599655 511 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC007938.3-201ENST00000604965 623 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC107214.2-201ENST00000608204 634 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AL355472.4-201ENST00000610233 626 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AL137847.3-201ENST00000611521 109 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AL031601.2-202ENST00000622650 282 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 AC091965.5-201ENST00000624785 342 ntBASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KLHL28Q9NXS3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AC016717.2-201ENST00000609089 5141 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 RPL21P132-201ENST00000331267 462 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 FAM133CP-201ENST00000332869 704 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 RNU6-906P-201ENST00000384700 70 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 SNORA3.2-201ENST00000408221 125 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 U6atac.2-201ENST00000408644 118 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 RNA5SP270-201ENST00000411361 118 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 VPS26BP1-201ENST00000417155 755 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 BX276092.3-201ENST00000424182 230 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 FABP5P14-201ENST00000437273 393 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 IPO7P1-201ENST00000442031 636 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms