Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 MAPK10-304ENST00000641341 3984 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 RNU6-778P-201ENST00000363269 103 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 SNORA51.4-201ENST00000364993 124 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 RNU6-613P-201ENST00000410412 108 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 RNA5SP144-201ENST00000410846 116 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 HLA-DPA3-207ENST00000454398 229 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 AC090958.1-201ENST00000511122 351 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 snoU109.6-201ENST00000516831 118 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC6.72□□□□□ -1.33
RNF39Q9H2S5 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF39Q9H2S5 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
RNF39Q9H2S5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF39Q9H2S5 AC091152.2-201ENST00000591628 2569 ntBASIC6.71□□□□□ -1.33
RNF39Q9H2S5 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.71□□□□□ -1.33
RNF39Q9H2S5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
RNF39Q9H2S5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RNF39Q9H2S5 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF39Q9H2S5 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 SNORA43.1-201ENST00000364863 140 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 Y_RNA.351-201ENST00000365436 96 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 RNU1-73P-201ENST00000383971 164 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 U8.11-201ENST00000384699 133 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 U8.18-201ENST00000459285 133 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 AC010401.1-201ENST00000463867 348 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 AC008155.2-201ENST00000464337 397 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 PPBPP1-201ENST00000510807 373 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 AC136777.2-201ENST00000522979 358 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 AC005618.1-201ENST00000606901 3148 ntBASIC6.71□□□□□ -1.34
RNF39Q9H2S5 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF39Q9H2S5 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 RNA5SP273-201ENST00000362484 113 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 RNA5SP477-201ENST00000362639 119 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 RNA5SP515-201ENST00000364570 118 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 SNORD14D-201ENST00000384390 87 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 SNORD77B-201ENST00000391112 67 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF39Q9H2S5 RNA5SP156-201ENST00000410250 110 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 RPS29P14-201ENST00000431518 171 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 RNU7-57P-201ENST00000459540 60 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 RNU6-807P-201ENST00000516805 107 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 RNU6-1231P-201ENST00000517185 103 ntBASIC6.7□□□□□ -1.34
RNF39Q9H2S5 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms