Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.41□□□□□ -1.86
CDT1Q9H211 AC073476.4-201ENST00000628409 72 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CDT1Q9H211 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.41□□□□□ -1.86
CDT1Q9H211 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CDT1Q9H211 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDT1Q9H211 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CDT1Q9H211 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.41□□□□□ -1.86
CDT1Q9H211 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDT1Q9H211 AC093010.3-201ENST00000570269 15214 ntBASIC3.4□□□□□ -1.86
CDT1Q9H211 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDT1Q9H211 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.4□□□□□ -1.86
CDT1Q9H211 AC006026.1-201ENST00000444025 1803 ntBASIC3.4□□□□□ -1.86
CDT1Q9H211 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CDT1Q9H211 RNU1-75P-201ENST00000347264 129 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 Y_RNA.367-201ENST00000365544 101 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.4□□□□□ -1.87
CDT1Q9H211 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDT1Q9H211 RNU6-641P-201ENST00000384006 107 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 RNU6-701P-201ENST00000384059 107 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 Y_RNA.481-201ENST00000384373 102 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 Y_RNA.529-201ENST00000384586 119 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 RNU6-1009P-201ENST00000390996 107 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 RNU2-39P-201ENST00000410604 198 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 AC018630.2-202ENST00000422992 927 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 RAC1P6-201ENST00000423911 575 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.4□□□□□ -1.87
CDT1Q9H211 ARF4P2-201ENST00000430209 526 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.4□□□□□ -1.87
CDT1Q9H211 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.4□□□□□ -1.87
CDT1Q9H211 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.4□□□□□ -1.87
CDT1Q9H211 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.4□□□□□ -1.87
CDT1Q9H211 AL049874.1-201ENST00000489560 388 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.4□□□□□ -1.87
CDT1Q9H211 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.4□□□□□ -1.87
CDT1Q9H211 RNA5SP341-201ENST00000516261 117 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 SNORA40.12-201ENST00000516329 111 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 RNU6-1153P-201ENST00000516760 105 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 RNU6-1092P-201ENST00000516955 87 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 OR4R1P-201ENST00000529879 463 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.4□□□□□ -1.87
CDT1Q9H211 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDT1Q9H211 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.4□□□□□ -1.87
CDT1Q9H211 BNIP3P10-201ENST00000605360 577 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.4□□□□□ -1.87
CDT1Q9H211 AC135507.2-201ENST00000612443 309 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 FRG1KP-201ENST00000623592 341 ntBASIC3.4□□□□□ -1.87
CDT1Q9H211 CKAP2P1-201ENST00000555477 2049 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.39□□□□□ -1.87
CDT1Q9H211 DEFB108F-201ENST00000344638 222 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 MIR422A-201ENST00000362286 90 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDT1Q9H211 NDUFS5P1-201ENST00000405668 289 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 Z98941.1-201ENST00000407764 100 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 RN7SKP285-201ENST00000410137 318 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AC114491.1-201ENST00000416095 246 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.39□□□□□ -1.87
CDT1Q9H211 PDCL2P1-201ENST00000419302 352 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 MTND1P14-201ENST00000427400 950 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.39□□□□□ -1.87
CDT1Q9H211 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AL136097.1-201ENST00000456945 913 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 RPL27AP5-201ENST00000469428 449 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AC126389.1-201ENST00000477436 290 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AC112206.3-201ENST00000514578 389 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 LRRC34P2-201ENST00000514850 553 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.39□□□□□ -1.87
CDT1Q9H211 CBX3P7-201ENST00000532876 502 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AL138976.2-201ENST00000563989 694 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AC055876.1-202ENST00000567053 138 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.39□□□□□ -1.87
CDT1Q9H211 RPS3AP23-202ENST00000574601 686 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AP001029.3-201ENST00000588063 596 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.39□□□□□ -1.87
CDT1Q9H211 DPPA3P3-201ENST00000603842 430 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.39□□□□□ -1.87
CDT1Q9H211 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AL354950.2-201ENST00000617939 290 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 AL589994.2-201ENST00000621124 579 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.39□□□□□ -1.87
CDT1Q9H211 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.39□□□□□ -1.87
CDT1Q9H211 MIR622-201ENST00000638396 96 ntBASIC3.39□□□□□ -1.87
CDT1Q9H211 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CDT1Q9H211 AL353746.1-201ENST00000566293 6881 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AC073343.1-201ENST00000328239 651 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 RNU6-960P-201ENST00000364056 120 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 Y_RNA.263-201ENST00000364659 114 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 SNORD15B-201ENST00000384714 146 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CDT1Q9H211 SNORD67-201ENST00000390833 111 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 RN7SKP140-201ENST00000411196 284 ntBASIC3.38□□□□□ -1.87
CDT1Q9H211 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms