Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NR1H4Q96RI1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
NR1H4Q96RI1 ADAM3A-203ENST00000461344 2157 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 GABRG2-229ENST00000641017 3628 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 MIR412-201ENST00000362142 91 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 MIR181A1-201ENST00000385026 110 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 SNORD37.1-201ENST00000390968 65 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 RNU6-1158P-201ENST00000391167 107 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 BPY2DP-201ENST00000422208 265 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC005300.1-201ENST00000428401 373 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AL606489.2-201ENST00000433886 234 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC098831.1-201ENST00000440661 216 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 HSFY6P-201ENST00000445573 403 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 TPT1P12-201ENST00000448968 492 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 GSTA11P-201ENST00000452866 669 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 RNU6-261P-201ENST00000459506 102 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 RPS29P12-201ENST00000460178 152 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AL163973.1-201ENST00000484753 577 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 SCARNA14-201ENST00000516903 136 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC009902.1-201ENST00000519351 183 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AL512360.1-201ENST00000555346 234 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC025281.1-201ENST00000567026 265 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC106782.4-201ENST00000568264 210 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 MTCO3P13-201ENST00000577757 781 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 MTATP6P3-201ENST00000581686 676 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC007621.1-201ENST00000604544 437 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC007938.3-201ENST00000604965 623 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC013562.2-201ENST00000611632 603 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AC005344.1-201ENST00000613391 459 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 ZYXP1-201ENST00000617638 118 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 AL354798.1-201ENST00000622505 329 ntBASIC3.11□□□□□ -1.91
NR1H4Q96RI1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NR1H4Q96RI1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 RNU6-192P-201ENST00000391253 100 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 CALM2P3-201ENST00000400429 449 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AL357075.1-201ENST00000404107 726 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AL590002.1-201ENST00000406554 418 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AC083798.1-201ENST00000472671 131 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 RPL21P13-201ENST00000488305 481 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 HMGB1P30-201ENST00000492455 606 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AC009901.1-201ENST00000506703 541 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AC008716.1-201ENST00000511084 513 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 SNORA40.12-201ENST00000516329 111 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 RN7SKP219-201ENST00000516825 296 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AC104383.1-201ENST00000530297 370 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 HMGB1P33-201ENST00000563485 527 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 MIR4286-201ENST00000580651 93 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 RNU1-30P-201ENST00000606575 163 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AC110079.1-202ENST00000635213 138 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NR1H4Q96RI1 AC108206.1-201ENST00000570186 4159 ntBASIC3.1□□□□□ -1.91
NR1H4Q96RI1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 Y_RNA.6-201ENST00000362350 114 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 RNU6-552P-201ENST00000362869 119 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 Y_RNA.255-201ENST00000364581 97 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 Y_RNA.381-201ENST00000365666 102 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 Y_RNA.516-201ENST00000384541 124 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 RNU6-1179P-201ENST00000384667 107 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 SNORA40C-201ENST00000391285 128 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 EEF1A1P40-201ENST00000412883 573 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 RPL21P90-201ENST00000415692 466 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AL139247.1-201ENST00000422768 325 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 MTCYBP8-201ENST00000422855 651 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AL365496.1-201ENST00000426885 215 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AL591419.1-201ENST00000427423 339 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 RPL7P2-201ENST00000427639 268 ntBASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.09□□□□□ -1.91
NR1H4Q96RI1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms