Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RPL7P12-201ENST00000446719 750 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RNU7-180P-201ENST00000459240 63 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC008481.1-201ENST00000463278 396 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RPL21P99-201ENST00000480369 423 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RNU6-1314P-201ENST00000517139 104 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AL118558.2-201ENST00000556294 238 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 ANP32BP3-201ENST00000559213 706 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 H3F3AP1-201ENST00000559984 334 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 MIR4795-201ENST00000584182 89 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 VN1R80P-201ENST00000597126 338 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC007687.1-201ENST00000602704 304 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC013553.2-201ENST00000604244 589 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC010133.1-201ENST00000615809 842 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 SNHG22-203ENST00000617833 660 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AL353748.2-201ENST00000622148 471 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC025034.2-201ENST00000623264 286 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC091903.1-201ENST00000624322 454 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AL157700.1-201ENST00000561973 1432 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 DDX10P1-201ENST00000448545 1933 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 RNU6-179P-201ENST00000363350 107 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 Y_RNA.231-201ENST00000364358 102 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 SNORA71.1-201ENST00000364523 117 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 SNORA23-201ENST00000365128 182 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 RNU4-66P-201ENST00000365199 138 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 SNORD37.1-201ENST00000390968 65 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 RNU2-29P-201ENST00000410423 189 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 RHEBP3-201ENST00000411920 351 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 AL137014.1-201ENST00000420490 1226 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 MTCO3P46-201ENST00000425787 232 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 ERLEC1P1-201ENST00000433806 578 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 MRPL50P4-201ENST00000446432 475 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 AC010401.1-201ENST00000463867 348 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 AP000873.1-201ENST00000463987 400 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 RBBP4P6-201ENST00000508098 202 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 RNU6-1038P-201ENST00000516516 104 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 RNU6-1153P-201ENST00000516760 105 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 RNA5SP503-201ENST00000517047 117 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 CBX3P7-201ENST00000532876 502 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 HPRT1P3-201ENST00000539521 576 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 AC093027.1-201ENST00000546698 429 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 SCOCP1-201ENST00000554676 349 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 PSMA3P-201ENST00000555485 635 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 MIR5583-1-201ENST00000580941 59 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 AP001486.3-201ENST00000615334 372 ntBASIC3.66□□□□□ -1.82
CCDC17Q96LX7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC17Q96LX7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC17Q96LX7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CCDC17Q96LX7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC17Q96LX7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC17Q96LX7 Y_RNA.166-201ENST00000363730 102 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 RNU6-701P-201ENST00000384059 107 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 SNORA54-201ENST00000384281 123 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 MIR634-201ENST00000385208 97 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 RNU6-837P-201ENST00000391056 108 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 RNU2-43P-201ENST00000410306 190 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 EEF1A1P40-201ENST00000412883 573 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 IFNA20P-201ENST00000436840 528 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 MTCO3P9-201ENST00000506989 781 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 RNU4-49P-201ENST00000516080 140 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 Y_RNA.675-201ENST00000516389 149 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 SNORA31.22-201ENST00000517204 135 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 BNIP3P6-201ENST00000549284 499 ntBASIC3.65□□□□□ -1.83
CCDC17Q96LX7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC17Q96LX7 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms