Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 FAM35CP-201ENST00000554755 2470 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 RNA5SP188-201ENST00000362916 129 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 SNORA33-201ENST00000363664 130 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 RNU1-59P-201ENST00000364829 162 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 RNU6-690P-201ENST00000365242 106 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 RNU6-217P-201ENST00000384164 104 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 MIR586-201ENST00000385035 97 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 RN7SKP281-201ENST00000410472 352 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 RPL23AP52-201ENST00000439311 478 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 RN7SL39P-201ENST00000462264 297 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 SNORA70.16-201ENST00000516390 95 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 FAS-AS1.2-201ENST00000620386 170 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 AC140134.1-201ENST00000511830 3544 ntBASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RNU6-600P-201ENST00000362524 99 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 SNORA73.1-201ENST00000363107 205 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 SNORD113.2-201ENST00000364166 89 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RNU6-1305P-201ENST00000364353 104 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RNA5SP485-201ENST00000365053 119 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RNA5SP77-201ENST00000365394 120 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 SNORD38C-201ENST00000384381 69 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RN7SKP151-201ENST00000410230 316 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 Y_RNA.607-201ENST00000410597 98 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC013403.1-201ENST00000436954 263 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC245102.2-201ENST00000448956 180 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC009963.2-201ENST00000453431 138 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RN7SL836P-201ENST00000476140 296 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RNU6-63P-201ENST00000516690 95 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 SNORA31.20-201ENST00000517111 133 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 SUMO2P16-201ENST00000519475 264 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC073916.1-201ENST00000545095 130 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 MIR4668-201ENST00000582284 70 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 RN7SL475P-201ENST00000583379 298 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC010624.4-201ENST00000597606 1351 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC021443.1-201ENST00000604478 211 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 MFSD8-239ENST00000641590 2479 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AC058791.1-201ENST00000608412 3198 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AL672167.1-204ENST00000641875 3017 ntBASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MS4A3Q96HJ5 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 AC020633.1-201ENST00000468439 2247 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 RNU6-1209P-201ENST00000363655 107 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 Y_RNA.190-201ENST00000363964 101 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 RNU6-944P-201ENST00000364023 107 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 AL133270.1-201ENST00000402635 279 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 SNRPGP10-201ENST00000432323 225 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 VDAC1P3-201ENST00000434069 851 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 RNA5SP418-201ENST00000515951 117 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 RNU6-581P-201ENST00000516214 105 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 RNU6-1006P-201ENST00000516998 103 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 AC107934.2-201ENST00000518653 310 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 MIR4694-201ENST00000578534 80 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 AC091152.3-201ENST00000604227 325 ntBASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MS4A3Q96HJ5 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms