Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 FRG1HP-204ENST00000617940 757 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 MIR409-201ENST00000362237 79 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 Y_RNA.518-201ENST00000384552 113 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 SSXP10-201ENST00000402595 565 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 AC016691.1-201ENST00000441321 413 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 SNORA31.13-201ENST00000516624 135 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 APOOP3-201ENST00000536787 586 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 MIR4653-201ENST00000585107 83 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 LINC01347-201ENST00000417964 355 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 MTND2P8-201ENST00000450555 1025 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 RPS20P10-201ENST00000451209 253 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 GTF2IP12-201ENST00000456547 356 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 AC095031.1-201ENST00000623685 672 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 MT-TP-201ENST00000387461 68 ntBASIC0.53□□□□□ -2.33
ALMS1Q8TCU4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.53□□□□□ -2.33
ALMS1Q8TCU4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.53□□□□□ -2.33
ALMS1Q8TCU4 Z77249.1-201ENST00000444622 1175 ntBASIC0.53□□□□□ -2.33
ALMS1Q8TCU4 AC098591.2-201ENST00000510152 315 ntBASIC0.53□□□□□ -2.33
ALMS1Q8TCU4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.53□□□□□ -2.33
ALMS1Q8TCU4 AL355810.1-201ENST00000614629 552 ntBASIC0.53□□□□□ -2.33
ALMS1Q8TCU4 AC126177.8-201ENST00000618339 1015 ntBASIC0.53□□□□□ -2.33
ALMS1Q8TCU4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 UBE2FP1-201ENST00000416536 447 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 SCARNA11.3-201ENST00000517276 130 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 NACAP2-201ENST00000318548 624 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 RNA5SP276-201ENST00000362580 94 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 Y_RNA.167-201ENST00000363735 109 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 RNU6-272P-201ENST00000411028 104 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 MIR6864-201ENST00000617935 70 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 AL118508.4-201ENST00000624142 1176 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 AC091925.2-201ENST00000625059 256 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 RNU6-1222P-201ENST00000384615 107 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 OR5B19P-201ENST00000531766 928 ntBASIC0.52□□□□□ -2.33
ALMS1Q8TCU4 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 SNORA8-201ENST00000384574 139 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 RNU2-70P-201ENST00000410718 179 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 LARP7P4-201ENST00000481075 878 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 SNORA48.10-201ENST00000516965 160 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC079148.1-201ENST00000565944 819 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 MIR618-201ENST00000385287 98 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 HMGN1P10-201ENST00000474557 553 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 Z95118.1-201ENST00000421372 247 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AL591704.2-201ENST00000421658 181 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC092648.1-201ENST00000425870 423 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC104692.1-201ENST00000472406 90 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 SNORA48.9-201ENST00000516419 162 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC133485.1-201ENST00000567176 124 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC138907.6-201ENST00000568401 126 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AP001269.3-201ENST00000588718 329 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC025588.2-201ENST00000604851 466 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC012676.2-201ENST00000619258 186 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC010329.5-201ENST00000623497 2174 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 AC110491.1-201ENST00000562191 2010 ntBASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
ALMS1Q8TCU4 Y_RNA.136-201ENST00000363444 102 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 RNU6-1155P-201ENST00000363554 107 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 AL356421.1-201ENST00000403255 413 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 AL158823.1-201ENST00000418441 478 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 AC010099.1-201ENST00000455434 375 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 AP001960.1-201ENST00000506494 658 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 AC007792.1-201ENST00000623023 402 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 AC024595.1-201ENST00000623088 387 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 RNU6-942P-201ENST00000363002 107 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 Y_RNA.324-201ENST00000365165 102 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 SNORA22-201ENST00000383907 134 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 SNORA22C-201ENST00000384614 134 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 RPL23AP32-201ENST00000395315 459 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 RNU7-23P-201ENST00000459465 62 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 OR2A41P-201ENST00000473586 105 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 RNU6-351P-201ENST00000516097 100 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 MTND4LP24-201ENST00000572277 291 ntBASIC0.5□□□□□ -2.33
ALMS1Q8TCU4 BNIP3P25-201ENST00000596023 559 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms