Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL354943.1-201ENST00000572103 781 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC018714.1-201ENST00000605028 208 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC103710.1-201ENST00000610003 901 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 TUSC7.1-201ENST00000610969 165 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AL589743.7-201ENST00000612637 233 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AL050303.3-201ENST00000613704 284 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC243829.7-201ENST00000633081 225 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC080128.1-201ENST00000474389 1917 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 RNU6-525P-201ENST00000363685 104 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 RNA5SP138-201ENST00000365098 114 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 SNORA67.4-201ENST00000384688 142 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 RNU6-253P-201ENST00000384730 105 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 U8.14-201ENST00000390843 143 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 U3.40-201ENST00000408706 208 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 NDUFS5P4-201ENST00000412983 318 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 ISCA1P1-201ENST00000426679 387 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC104651.1-201ENST00000427559 735 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC093106.2-201ENST00000428212 385 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 IPO7P1-201ENST00000442031 636 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AL139109.1-201ENST00000455491 297 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 RNU6-717P-201ENST00000459076 104 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC116347.2-201ENST00000514912 523 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 RNU5F-8P-201ENST00000515941 111 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 RNA5SP281-201ENST00000516504 135 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 RNU1-40P-201ENST00000516816 164 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 RNU1-97P-201ENST00000516872 164 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC109329.2-201ENST00000519658 482 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 LRRC37A5P-203ENST00000580181 585 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC024619.4-201ENST00000580924 316 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC073544.2-201ENST00000601155 540 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC079416.3-201ENST00000624479 549 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC092192.1-201ENST00000633154 1018 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 AC004520.1-201ENST00000608362 1413 ntBASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC50Q8IVM0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 RNU6-658P-201ENST00000384606 106 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 MIR221-201ENST00000385135 110 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AL109913.1-201ENST00000421173 514 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AL353729.1-201ENST00000425044 720 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AL354941.1-201ENST00000438600 464 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AL606517.1-201ENST00000446914 387 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 TRBV1-201ENST00000476502 284 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC004263.1-201ENST00000479327 332 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC008413.1-201ENST00000511864 177 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 BTF3P12-201ENST00000519620 469 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 ARL2BPP2-201ENST00000550907 489 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC090888.2-201ENST00000559765 1144 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 MIR4448-201ENST00000584360 86 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AL356280.1-201ENST00000603614 379 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AP000860.1-201ENST00000605250 559 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 DUSP12P1-201ENST00000612874 516 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC245884.12-201ENST00000615364 59 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AP002782.1-201ENST00000623107 614 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC025034.2-201ENST00000623264 286 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 AC007490.1-201ENST00000624321 703 ntBASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC50Q8IVM0 Y_RNA.18-201ENST00000362461 102 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 RNU6-288P-201ENST00000363690 104 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 RNU6-1284P-201ENST00000363701 100 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 RNY3P13-201ENST00000365542 102 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 SNORA6-201ENST00000384033 151 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 MIR524-201ENST00000385242 87 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AL021407.1-201ENST00000404531 386 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 RNU4-72P-201ENST00000410754 173 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 MYL8P-204ENST00000431574 518 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC098831.1-201ENST00000440661 216 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AL606662.1-201ENST00000445763 553 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 COX6CP12-201ENST00000446748 202 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms