Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HMGB1P27-201ENST00000431429 603 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC018634.1-201ENST00000437554 401 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AL354941.1-201ENST00000438600 464 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 SNORD11.1-201ENST00000459482 85 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 TRBV1-201ENST00000476502 284 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC109486.1-201ENST00000486833 374 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC139453.3-201ENST00000493276 369 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC234781.5-201ENST00000508429 271 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC022447.1-201ENST00000515358 464 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AP001004.1-201ENST00000582468 324 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC005261.5-201ENST00000596280 355 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC112187.2-201ENST00000604345 283 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC018714.1-201ENST00000605028 208 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC107294.1-201ENST00000609524 467 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 RNY4P24-201ENST00000362735 96 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 Y_RNA.97-201ENST00000363094 102 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-658P-201ENST00000384606 106 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AL606517.1-201ENST00000446914 387 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 Z73417.1-201ENST00000447373 778 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 RNA5SP148-201ENST00000516527 94 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 BTF3P12-201ENST00000519620 469 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 RPL7P20-201ENST00000520308 745 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AC123904.2-201ENST00000548059 300 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AC007151.1-201ENST00000572774 483 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 MIR3146-201ENST00000580367 79 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 KC877982.1-201ENST00000602313 470 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AL391813.1-201ENST00000603098 260 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AP000811.1-201ENST00000603803 651 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AL121917.1-203ENST00000605534 577 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AL050303.3-201ENST00000613704 284 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 MIR6817-201ENST00000615588 66 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AC007998.5-201ENST00000622938 237 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 MTND4P27-201ENST00000450813 1354 ntBASIC2.2□□□□□ -2.06
NUDCD3Q8IVD9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 RNY3P13-201ENST00000365542 102 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 SNORA6-201ENST00000384033 151 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 RPS20P2-201ENST00000402520 389 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 ELOCP17-201ENST00000414751 326 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 RPL22P18-201ENST00000417197 377 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 NUP35P1-201ENST00000422734 947 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 NEFMP1-201ENST00000443423 1006 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 GDI2P2-201ENST00000445131 608 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AL606662.1-201ENST00000445763 553 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 HMGN2P10-201ENST00000448085 265 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC116347.2-201ENST00000514912 523 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-703P-201ENST00000516946 107 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-1003P-201ENST00000517099 105 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 MRPS36P3-201ENST00000519284 130 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 MTCYBP20-201ENST00000524239 1129 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC006199.1-201ENST00000548728 219 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 MRPS36P5-201ENST00000551909 298 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC021739.1-201ENST00000559631 174 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC073544.2-201ENST00000601155 540 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AL355598.1-201ENST00000604169 202 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC007363.1-201ENST00000604736 620 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC025588.2-201ENST00000604851 466 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC144521.1-201ENST00000607148 956 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 MIR6840-201ENST00000611937 71 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC009159.1-201ENST00000618386 642 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC009831.4-201ENST00000620744 325 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 ADAM3A-203ENST00000461344 2157 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 AC010329.5-201ENST00000623497 2174 ntBASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NUDCD3Q8IVD9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NUDCD3Q8IVD9 NACAP2-201ENST00000318548 624 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms