Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.67□□□□□ -1.5
RC3H1Q5TC82 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RC3H1Q5TC82 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC007685.1-201ENST00000329806 452 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 RN7SKP202-201ENST00000410439 330 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 RNU5E-9P-201ENST00000411164 104 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC079809.1-201ENST00000415468 276 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC010154.1-201ENST00000425857 269 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AL451062.2-201ENST00000427515 271 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AL117339.2-201ENST00000430475 180 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 RPL23AP52-201ENST00000439311 478 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 U8.22-201ENST00000459141 133 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC114982.1-201ENST00000469402 321 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 RPL23AP2-201ENST00000471227 466 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 RNY3P16-201ENST00000516338 101 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 RN7SKP258-201ENST00000517151 304 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 CYCSP40-201ENST00000575927 294 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 MIR4308-201ENST00000580634 81 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC009314.1-201ENST00000603871 304 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 SNORD113-5-201ENST00000607261 78 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC004852.3-201ENST00000614131 326 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC010329.2-201ENST00000595195 2737 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC009229.4-201ENST00000623854 1947 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RC3H1Q5TC82 AC092079.1-201ENST00000558620 1985 ntBASIC5.66□□□□□ -1.5
RC3H1Q5TC82 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC083843.3-201ENST00000623679 2186 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 RNU6-449P-201ENST00000383914 107 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.623-201ENST00000411128 95 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC063979.1-201ENST00000415539 377 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 SSXP4-201ENST00000451349 245 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC079354.2-201ENST00000453523 154 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 snoU13.22-201ENST00000459428 104 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 RN7SL542P-201ENST00000467147 294 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 HMGN1P11-201ENST00000508668 303 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 RNU5F-8P-201ENST00000515941 111 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 NF1P5-201ENST00000588287 448 ntBASIC5.65□□□□□ -1.5
RC3H1Q5TC82 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.65□□□□□ -1.5
RC3H1Q5TC82 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RC3H1Q5TC82 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.65□□□□□ -1.51
RC3H1Q5TC82 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.51
RC3H1Q5TC82 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.65□□□□□ -1.51
RC3H1Q5TC82 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 AC092376.2-201ENST00000622621 4116 ntBASIC5.64□□□□□ -1.51
RC3H1Q5TC82 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 Y_RNA.569-201ENST00000384749 103 ntBASIC5.64□□□□□ -1.51
RC3H1Q5TC82 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 AL096701.2-201ENST00000416920 238 ntBASIC5.64□□□□□ -1.51
RC3H1Q5TC82 ANXA2P1-201ENST00000505539 926 ntBASIC5.64□□□□□ -1.51
RC3H1Q5TC82 RNA5SP49-201ENST00000516450 115 ntBASIC5.64□□□□□ -1.51
RC3H1Q5TC82 Y_RNA.706-201ENST00000516933 99 ntBASIC5.64□□□□□ -1.51
RC3H1Q5TC82 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 AL109809.4-201ENST00000603520 2185 ntBASIC5.64□□□□□ -1.51
RC3H1Q5TC82 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RC3H1Q5TC82 AC100821.1-201ENST00000523153 2479 ntBASIC5.64□□□□□ -1.51
RC3H1Q5TC82 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.63□□□□□ -1.51
RC3H1Q5TC82 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms