Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AL442644.1-201ENST00000454390 3105 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 ZNF29P-201ENST00000225587 168 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 RNA5SP125-201ENST00000364843 120 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.15□□□□□ -2.22
CPSF1Q10570 RNU2-32P-201ENST00000411193 191 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.15□□□□□ -2.22
CPSF1Q10570 UBE2FP1-201ENST00000416536 447 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 CBX3P6-201ENST00000430257 527 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 MTND4LP10-201ENST00000435146 291 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.15□□□□□ -2.22
CPSF1Q10570 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.15□□□□□ -2.22
CPSF1Q10570 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.15□□□□□ -2.22
CPSF1Q10570 C1DP5-201ENST00000525775 383 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 IMMP1LP2-201ENST00000552954 492 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.15□□□□□ -2.22
CPSF1Q10570 AC112191.3-201ENST00000604371 277 ntBASIC1.15□□□□□ -2.22
CPSF1Q10570 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.23
CPSF1Q10570 AL022400.1-201ENST00000423946 935 ntBASIC1.15□□□□□ -2.23
CPSF1Q10570 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.15□□□□□ -2.23
CPSF1Q10570 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.15□□□□□ -2.23
CPSF1Q10570 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.15□□□□□ -2.23
CPSF1Q10570 RNU6-488P-201ENST00000515918 99 ntBASIC1.15□□□□□ -2.23
CPSF1Q10570 RNU6-1095P-201ENST00000516148 108 ntBASIC1.15□□□□□ -2.23
CPSF1Q10570 RNU6-1282P-201ENST00000516735 96 ntBASIC1.15□□□□□ -2.23
CPSF1Q10570 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.15□□□□□ -2.23
CPSF1Q10570 AP002791.1-201ENST00000623291 381 ntBASIC1.15□□□□□ -2.23
CPSF1Q10570 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.14□□□□□ -2.23
CPSF1Q10570 AC007785.2-201ENST00000598627 1916 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CPSF1Q10570 DEFB108F-201ENST00000344638 222 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 SNORA51.12-201ENST00000384448 134 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 RNY1P4-201ENST00000384595 115 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 MIR216A-201ENST00000385063 110 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 AL158823.1-201ENST00000418441 478 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 HMGB1P9-201ENST00000429856 646 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 MICF-203ENST00000432679 129 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 THAP5P1-201ENST00000439089 262 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF1Q10570 AL583843.1-201ENST00000456070 346 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 RPS20P24-201ENST00000457473 361 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.14□□□□□ -2.23
CPSF1Q10570 AL049714.1-201ENST00000466686 347 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 AC021382.1-201ENST00000483523 359 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 AC139453.3-201ENST00000493276 369 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 AC114801.2-201ENST00000503825 781 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CPSF1Q10570 AC022616.2-201ENST00000523185 300 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 DEFB108D-201ENST00000527787 222 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.14□□□□□ -2.23
CPSF1Q10570 AL133241.1-201ENST00000556832 487 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF1Q10570 MIR3921-201ENST00000577308 85 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.14□□□□□ -2.23
CPSF1Q10570 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CPSF1Q10570 AC040168.1-201ENST00000623594 991 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 AP003400.5-201ENST00000624827 617 ntBASIC1.14□□□□□ -2.23
CPSF1Q10570 UBE2V1P9-201ENST00000414760 368 ntBASIC1.13□□□□□ -2.23
CPSF1Q10570 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF1Q10570 POLR2J4-204ENST00000418424 324 ntBASIC1.13□□□□□ -2.23
CPSF1Q10570 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.13□□□□□ -2.23
CPSF1Q10570 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
CPSF1Q10570 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF1Q10570 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF1Q10570 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.13□□□□□ -2.23
CPSF1Q10570 AC068057.2-201ENST00000624047 895 ntBASIC1.13□□□□□ -2.23
CPSF1Q10570 AC025048.6-202ENST00000627667 438 ntBASIC1.13□□□□□ -2.23
CPSF1Q10570 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CPSF1Q10570 AC010385.1-201ENST00000412374 256 ntBASIC1.12□□□□□ -2.23
CPSF1Q10570 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF1Q10570 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.12□□□□□ -2.23
CPSF1Q10570 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.12□□□□□ -2.23
CPSF1Q10570 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF1Q10570 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CPSF1Q10570 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CPSF1Q10570 MIR892C-201ENST00000516410 77 ntBASIC1.12□□□□□ -2.23
CPSF1Q10570 SCARNA3-201ENST00000517097 143 ntBASIC1.12□□□□□ -2.23
CPSF1Q10570 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF1Q10570 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF1Q10570 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF1Q10570 CR383656.8-201ENST00000549046 145 ntBASIC1.12□□□□□ -2.23
CPSF1Q10570 OR5H6-203ENST00000642105 978 ntBASIC1.12□□□□□ -2.23
CPSF1Q10570 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CPSF1Q10570 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
CPSF1Q10570 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CPSF1Q10570 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
CPSF1Q10570 RNU6-17P-201ENST00000384245 107 ntBASIC1.11□□□□□ -2.23
CPSF1Q10570 RNU6-18P-201ENST00000384527 107 ntBASIC1.11□□□□□ -2.23
CPSF1Q10570 RNU6-441P-201ENST00000384545 106 ntBASIC1.11□□□□□ -2.23
CPSF1Q10570 AC244636.1-201ENST00000421152 228 ntBASIC1.11□□□□□ -2.23
CPSF1Q10570 FO393419.3-201ENST00000428741 282 ntBASIC1.11□□□□□ -2.23
CPSF1Q10570 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.11□□□□□ -2.23
CPSF1Q10570 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.11□□□□□ -2.23
CPSF1Q10570 AC079448.1-201ENST00000449377 373 ntBASIC1.11□□□□□ -2.23
CPSF1Q10570 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.11□□□□□ -2.23
CPSF1Q10570 AC025459.1-201ENST00000504072 156 ntBASIC1.11□□□□□ -2.23
CPSF1Q10570 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.11□□□□□ -2.23
CPSF1Q10570 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.11□□□□□ -2.23
CPSF1Q10570 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.11□□□□□ -2.23
CPSF1Q10570 AL021997.1-201ENST00000605757 193 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms