Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EFNB1P98172 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EFNB1P98172 SNORD3E-201ENST00000362899 217 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 RNU4-66P-201ENST00000365199 138 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
EFNB1P98172 RNU6-434P-201ENST00000384376 107 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 SNORA16.2-201ENST00000390991 127 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 RN7SKP111-201ENST00000410349 271 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 Y_RNA.623-201ENST00000411128 95 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 AL356968.1-201ENST00000416622 474 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.09□□□□□ -1.91
EFNB1P98172 AC245291.1-201ENST00000419501 328 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.09□□□□□ -1.91
EFNB1P98172 AC073063.1-201ENST00000434352 607 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 NDUFB1P2-201ENST00000449477 176 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 AL583843.1-201ENST00000456070 346 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 RPS27P29-201ENST00000463110 252 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 RPL23AP67-201ENST00000465341 474 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 HMGB1P30-201ENST00000492455 606 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.09□□□□□ -1.91
EFNB1P98172 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.09□□□□□ -1.91
EFNB1P98172 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 AC093331.1-201ENST00000521474 169 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.09□□□□□ -1.91
EFNB1P98172 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.09□□□□□ -1.91
EFNB1P98172 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.09□□□□□ -1.91
EFNB1P98172 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.09□□□□□ -1.91
EFNB1P98172 NUTF2P8-201ENST00000604593 363 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
EFNB1P98172 AC119674.1-207ENST00000641355 633 ntBASIC3.09□□□□□ -1.91
EFNB1P98172 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EFNB1P98172 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
EFNB1P98172 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.09□□□□□ -1.92
EFNB1P98172 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
EFNB1P98172 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB1P98172 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
EFNB1P98172 OR4G1P-203ENST00000641984 1631 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB1P98172 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB1P98172 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 RNU4-20P-201ENST00000365601 151 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 RNU6-38P-201ENST00000384085 107 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 U8.11-201ENST00000384699 133 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 U8.12-201ENST00000384701 133 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 SNORA48.8-201ENST00000391324 134 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AL356057.2-201ENST00000403318 432 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 RPL5P18-201ENST00000406671 891 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 OR9R1P-201ENST00000412200 877 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 BX323014.1-201ENST00000412876 237 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AL353621.1-201ENST00000418219 243 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
EFNB1P98172 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.08□□□□□ -1.92
EFNB1P98172 AL365496.1-201ENST00000426885 215 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AC005300.1-201ENST00000428401 373 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 RPL21P40-201ENST00000428586 483 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 USP9YP28-201ENST00000435142 589 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 CALM1P1-201ENST00000442082 433 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.08□□□□□ -1.92
EFNB1P98172 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 MTND3P16-201ENST00000452205 344 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 RNU6-333P-201ENST00000459117 107 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 U8.18-201ENST00000459285 133 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AC104472.2-201ENST00000469035 601 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.08□□□□□ -1.92
EFNB1P98172 AC091885.1-201ENST00000506658 268 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 CCDC34P1-201ENST00000507441 517 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 MTND3P25-201ENST00000509243 135 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 RNU2-69P-201ENST00000516061 100 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 SNORA70.18-201ENST00000516696 98 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 SCARNA20.6-201ENST00000517251 106 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.08□□□□□ -1.92
EFNB1P98172 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.08□□□□□ -1.92
EFNB1P98172 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.08□□□□□ -1.92
EFNB1P98172 AC037471.2-201ENST00000564941 598 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 CYCSP39-201ENST00000565821 309 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 RN7SL703P-201ENST00000578485 302 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AC012119.1-201ENST00000603184 222 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AC024220.1-201ENST00000603675 484 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AC068944.2-201ENST00000610373 403 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 MIR6875-201ENST00000617506 72 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.08□□□□□ -1.92
EFNB1P98172 AC022418.1-201ENST00000624118 445 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 AP003400.5-201ENST00000624827 617 ntBASIC3.08□□□□□ -1.92
EFNB1P98172 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB1P98172 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.08□□□□□ -1.92
EFNB1P98172 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB1P98172 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
EFNB1P98172 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
EFNB1P98172 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
EFNB1P98172 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.07□□□□□ -1.92
EFNB1P98172 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
EFNB1P98172 MIR148B-201ENST00000362252 99 ntBASIC3.07□□□□□ -1.92
EFNB1P98172 RNU6-799P-201ENST00000363567 107 ntBASIC3.07□□□□□ -1.92
EFNB1P98172 SNORD14B-201ENST00000364533 90 ntBASIC3.07□□□□□ -1.92
EFNB1P98172 Y_RNA.399-201ENST00000383955 105 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 251 ms