Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
VARSP26640 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.2□□□□□ -1.58
VARSP26640 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VARSP26640 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VARSP26640 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
VARSP26640 AC116096.1-201ENST00000566804 2314 ntBASIC5.19□□□□□ -1.58
VARSP26640 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VARSP26640 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.19□□□□□ -1.58
VARSP26640 AL672167.1-204ENST00000641875 3017 ntBASIC5.19□□□□□ -1.58
VARSP26640 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
VARSP26640 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VARSP26640 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VARSP26640 MIR133B-201ENST00000362210 119 ntBASIC5.19□□□□□ -1.58
VARSP26640 RNA5SP183-201ENST00000362452 119 ntBASIC5.19□□□□□ -1.58
VARSP26640 RNU6-1074P-201ENST00000383995 104 ntBASIC5.19□□□□□ -1.58
VARSP26640 MIR514A1-201ENST00000385133 98 ntBASIC5.19□□□□□ -1.58
VARSP26640 MIR550A3-201ENST00000390735 95 ntBASIC5.19□□□□□ -1.58
VARSP26640 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VARSP26640 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VARSP26640 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.19□□□□□ -1.58
VARSP26640 MIR1271-201ENST00000408537 86 ntBASIC5.19□□□□□ -1.58
VARSP26640 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.19□□□□□ -1.58
VARSP26640 RPS11P7-201ENST00000442125 465 ntBASIC5.19□□□□□ -1.58
VARSP26640 RPSAP50-201ENST00000481955 852 ntBASIC5.19□□□□□ -1.58
VARSP26640 AC093270.2-201ENST00000486157 792 ntBASIC5.19□□□□□ -1.58
VARSP26640 AF186996.7-201ENST00000492781 209 ntBASIC5.19□□□□□ -1.58
VARSP26640 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.19□□□□□ -1.58
VARSP26640 AC110774.1-201ENST00000623567 2018 ntBASIC5.19□□□□□ -1.58
VARSP26640 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VARSP26640 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VARSP26640 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VARSP26640 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.19□□□□□ -1.58
VARSP26640 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VARSP26640 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VARSP26640 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VARSP26640 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VARSP26640 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
VARSP26640 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VARSP26640 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VARSP26640 RNA5SP335-201ENST00000363817 110 ntBASIC5.18□□□□□ -1.58
VARSP26640 Y_RNA.245-201ENST00000364493 95 ntBASIC5.18□□□□□ -1.58
VARSP26640 RNU6-281P-201ENST00000384212 103 ntBASIC5.18□□□□□ -1.58
VARSP26640 SNORA70E-201ENST00000384492 135 ntBASIC5.18□□□□□ -1.58
VARSP26640 MIR10B-201ENST00000385011 110 ntBASIC5.18□□□□□ -1.58
VARSP26640 RNU1-77P-201ENST00000390868 162 ntBASIC5.18□□□□□ -1.58
VARSP26640 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.18□□□□□ -1.58
VARSP26640 RAB28P5-201ENST00000427490 651 ntBASIC5.18□□□□□ -1.58
VARSP26640 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.18□□□□□ -1.58
VARSP26640 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.18□□□□□ -1.58
VARSP26640 RNU6-1211P-201ENST00000459179 105 ntBASIC5.18□□□□□ -1.58
VARSP26640 AC139453.3-201ENST00000493276 369 ntBASIC5.18□□□□□ -1.58
VARSP26640 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
VARSP26640 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VARSP26640 AC093840.1-201ENST00000511599 336 ntBASIC5.18□□□□□ -1.58
VARSP26640 Y_RNA.686-201ENST00000516548 134 ntBASIC5.18□□□□□ -1.58
VARSP26640 UBL5P4-201ENST00000562584 236 ntBASIC5.18□□□□□ -1.58
VARSP26640 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.18□□□□□ -1.58
VARSP26640 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.18□□□□□ -1.58
VARSP26640 RN7SL356P-201ENST00000582228 248 ntBASIC5.18□□□□□ -1.58
VARSP26640 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.18□□□□□ -1.58
VARSP26640 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.18□□□□□ -1.58
VARSP26640 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.18□□□□□ -1.58
VARSP26640 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VARSP26640 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VARSP26640 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VARSP26640 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.18□□□□□ -1.58
VARSP26640 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VARSP26640 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.18□□□□□ -1.58
VARSP26640 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.17□□□□□ -1.58
VARSP26640 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VARSP26640 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.17□□□□□ -1.58
VARSP26640 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
VARSP26640 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VARSP26640 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VARSP26640 RNU6-1298P-201ENST00000362456 101 ntBASIC5.17□□□□□ -1.58
VARSP26640 RNA5SP305-201ENST00000362665 119 ntBASIC5.17□□□□□ -1.58
VARSP26640 Y_RNA.43-201ENST00000362670 111 ntBASIC5.17□□□□□ -1.58
VARSP26640 RNU6-105P-201ENST00000363909 104 ntBASIC5.17□□□□□ -1.58
VARSP26640 RNU6-741P-201ENST00000383889 107 ntBASIC5.17□□□□□ -1.58
VARSP26640 RNU6-213P-201ENST00000384051 104 ntBASIC5.17□□□□□ -1.58
VARSP26640 SNORA51.8-201ENST00000384234 132 ntBASIC5.17□□□□□ -1.58
VARSP26640 MIR585-201ENST00000384887 94 ntBASIC5.17□□□□□ -1.58
VARSP26640 MIR329-1-201ENST00000385028 80 ntBASIC5.17□□□□□ -1.58
VARSP26640 MIR765-201ENST00000390226 114 ntBASIC5.17□□□□□ -1.58
VARSP26640 RNU6-239P-201ENST00000390990 99 ntBASIC5.17□□□□□ -1.58
VARSP26640 HLFP1-201ENST00000402375 499 ntBASIC5.17□□□□□ -1.58
VARSP26640 COX5BP7-201ENST00000414780 274 ntBASIC5.17□□□□□ -1.58
VARSP26640 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
VARSP26640 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.17□□□□□ -1.58
VARSP26640 RPL12P3-201ENST00000440080 396 ntBASIC5.17□□□□□ -1.58
VARSP26640 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.17□□□□□ -1.58
VARSP26640 AC092798.1-201ENST00000458542 409 ntBASIC5.17□□□□□ -1.58
VARSP26640 RPL7AP6-201ENST00000477943 801 ntBASIC5.17□□□□□ -1.58
VARSP26640 SNORA25.12-201ENST00000516202 82 ntBASIC5.17□□□□□ -1.58
VARSP26640 RN7SKP66-201ENST00000516681 231 ntBASIC5.17□□□□□ -1.58
VARSP26640 RNU6-572P-201ENST00000516724 80 ntBASIC5.17□□□□□ -1.58
VARSP26640 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.17□□□□□ -1.58
VARSP26640 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.17□□□□□ -1.58
VARSP26640 AL121603.1-201ENST00000553815 142 ntBASIC5.17□□□□□ -1.58
VARSP26640 RN7SL708P-201ENST00000580952 299 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms