Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SNORA25.17-201ENST00000517184 124 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.41□□□□□ -1.86
TNFSF4P23510 AC006199.1-201ENST00000548728 219 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.41□□□□□ -1.86
TNFSF4P23510 GNRHR2P1-201ENST00000555315 631 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.41□□□□□ -1.86
TNFSF4P23510 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.41□□□□□ -1.86
TNFSF4P23510 AC005498.1-201ENST00000592125 465 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 AL606490.9-201ENST00000603331 271 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 AL035413.2-201ENST00000604801 525 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 ATP1B3P1-201ENST00000605365 821 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 AC005344.1-201ENST00000613391 459 ntBASIC3.41□□□□□ -1.86
TNFSF4P23510 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TNFSF4P23510 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
TNFSF4P23510 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TNFSF4P23510 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TNFSF4P23510 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TNFSF4P23510 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.4□□□□□ -1.86
TNFSF4P23510 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TNFSF4P23510 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.4□□□□□ -1.86
TNFSF4P23510 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFSF4P23510 RNU6-72P-201ENST00000384285 79 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
TNFSF4P23510 Y_RNA.615-201ENST00000410769 117 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 RHEBP3-201ENST00000411920 351 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFSF4P23510 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.4□□□□□ -1.87
TNFSF4P23510 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFSF4P23510 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFSF4P23510 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFSF4P23510 HMGB3P22-202ENST00000451823 572 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFSF4P23510 RPL7P20-201ENST00000520308 745 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TNFSF4P23510 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFSF4P23510 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFSF4P23510 AC010653.1-201ENST00000571108 881 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFSF4P23510 BNIP3P10-201ENST00000605360 577 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 AC002044.1-201ENST00000606707 158 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 MIR6500-201ENST00000622700 86 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 AC068724.3-201ENST00000625906 87 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFSF4P23510 AC110079.1-202ENST00000635213 138 ntBASIC3.4□□□□□ -1.87
TNFSF4P23510 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFSF4P23510 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFSF4P23510 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFSF4P23510 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFSF4P23510 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFSF4P23510 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFSF4P23510 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFSF4P23510 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFSF4P23510 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFSF4P23510 RNU6-1280P-201ENST00000365211 107 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 Y_RNA.530-201ENST00000384587 101 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 RNU6-750P-201ENST00000390946 107 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 Z98941.1-201ENST00000407764 100 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 RNU2-49P-201ENST00000410666 184 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 RAB9AP3-201ENST00000412737 573 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 RPL30P16-201ENST00000419341 429 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 PGBD4P6-201ENST00000421501 610 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 RPL7P2-201ENST00000427639 268 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFSF4P23510 AL671855.1-201ENST00000446875 1203 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AC125238.1-201ENST00000448842 249 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 RAB9AP1-201ENST00000449393 573 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 NUTF2P7-201ENST00000453086 375 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AC006026.2-201ENST00000457376 180 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 RPS27P26-201ENST00000494583 239 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AC093663.1-201ENST00000497190 394 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.39□□□□□ -1.87
TNFSF4P23510 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFSF4P23510 SNORA19.2-201ENST00000516013 114 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 IGHV3-76-201ENST00000522465 295 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AP004607.1-201ENST00000524456 203 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFSF4P23510 AL121821.2-201ENST00000556081 394 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFSF4P23510 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFSF4P23510 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFSF4P23510 BNIP3P25-201ENST00000596023 559 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AL020997.2-201ENST00000602607 184 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AL592436.1-201ENST00000605135 558 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFSF4P23510 AL773545.4-201ENST00000637262 310 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 AL513478.4-201ENST00000641636 310 ntBASIC3.39□□□□□ -1.87
TNFSF4P23510 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFSF4P23510 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TNFSF4P23510 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFSF4P23510 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TNFSF4P23510 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFSF4P23510 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFSF4P23510 Y_RNA.167-201ENST00000363735 109 ntBASIC3.38□□□□□ -1.87
TNFSF4P23510 Y_RNA.373-201ENST00000365600 103 ntBASIC3.38□□□□□ -1.87
TNFSF4P23510 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFSF4P23510 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFSF4P23510 RNA5SP306-201ENST00000411087 107 ntBASIC3.38□□□□□ -1.87
TNFSF4P23510 AC016831.2-201ENST00000417179 352 ntBASIC3.38□□□□□ -1.87
TNFSF4P23510 USP9YP20-201ENST00000419224 558 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms