Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.94□□□□□ -2.1
TPM1P09493 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.94□□□□□ -2.1
TPM1P09493 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
TPM1P09493 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TPM1P09493 SNORA25.11-201ENST00000515935 105 ntBASIC1.94□□□□□ -2.1
TPM1P09493 SNORA26.10-201ENST00000516427 141 ntBASIC1.94□□□□□ -2.1
TPM1P09493 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.94□□□□□ -2.1
TPM1P09493 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.94□□□□□ -2.1
TPM1P09493 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.94□□□□□ -2.1
TPM1P09493 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TPM1P09493 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.94□□□□□ -2.1
TPM1P09493 AC073544.2-201ENST00000601155 540 ntBASIC1.94□□□□□ -2.1
TPM1P09493 AC098826.3-201ENST00000603823 466 ntBASIC1.94□□□□□ -2.1
TPM1P09493 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TPM1P09493 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.94□□□□□ -2.1
TPM1P09493 AL354696.1-201ENST00000614652 497 ntBASIC1.94□□□□□ -2.1
TPM1P09493 AC023158.2-201ENST00000614876 543 ntBASIC1.94□□□□□ -2.1
TPM1P09493 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TPM1P09493 AC091953.2-201ENST00000623979 160 ntBASIC1.94□□□□□ -2.1
TPM1P09493 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.94□□□□□ -2.1
TPM1P09493 IGHVIII-44-202ENST00000636235 289 ntBASIC1.94□□□□□ -2.1
TPM1P09493 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.94□□□□□ -2.1
TPM1P09493 AC092881.1-201ENST00000638218 2733 ntBASIC1.94□□□□□ -2.1
TPM1P09493 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.93□□□□□ -2.1
TPM1P09493 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.93□□□□□ -2.1
TPM1P09493 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.93□□□□□ -2.1
TPM1P09493 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.93□□□□□ -2.1
TPM1P09493 Z98742.3-201ENST00000418637 326 ntBASIC1.93□□□□□ -2.1
TPM1P09493 C1DP1-201ENST00000426049 402 ntBASIC1.93□□□□□ -2.1
TPM1P09493 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.93□□□□□ -2.1
TPM1P09493 GPM6BP2-201ENST00000432046 144 ntBASIC1.93□□□□□ -2.1
TPM1P09493 RPL36AP53-201ENST00000432891 316 ntBASIC1.93□□□□□ -2.1
TPM1P09493 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.93□□□□□ -2.1
TPM1P09493 MTND5P14-201ENST00000441481 1267 ntBASIC1.93□□□□□ -2.1
TPM1P09493 MTCO1P53-201ENST00000441633 699 ntBASIC1.93□□□□□ -2.1
TPM1P09493 GPM6BP1-201ENST00000446387 144 ntBASIC1.93□□□□□ -2.1
TPM1P09493 AP001486.1-201ENST00000463339 476 ntBASIC1.93□□□□□ -2.1
TPM1P09493 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
TPM1P09493 AL512310.1-201ENST00000548639 172 ntBASIC1.93□□□□□ -2.1
TPM1P09493 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.93□□□□□ -2.1
TPM1P09493 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.93□□□□□ -2.1
TPM1P09493 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.93□□□□□ -2.1
TPM1P09493 MIR3912-201ENST00000577566 105 ntBASIC1.93□□□□□ -2.1
TPM1P09493 AC091057.3-201ENST00000602684 733 ntBASIC1.93□□□□□ -2.1
TPM1P09493 AL078605.1-201ENST00000603529 500 ntBASIC1.93□□□□□ -2.1
TPM1P09493 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TPM1P09493 MIR518A2-201ENST00000384966 87 ntBASIC1.92□□□□□ -2.1
TPM1P09493 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
TPM1P09493 SNORA40.19-201ENST00000390846 128 ntBASIC1.92□□□□□ -2.1
TPM1P09493 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TPM1P09493 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.92□□□□□ -2.1
TPM1P09493 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.92□□□□□ -2.1
TPM1P09493 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.92□□□□□ -2.1
TPM1P09493 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
TPM1P09493 MRPS36P1-201ENST00000421291 307 ntBASIC1.92□□□□□ -2.1
TPM1P09493 AC244035.1-201ENST00000430042 390 ntBASIC1.92□□□□□ -2.1
TPM1P09493 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.92□□□□□ -2.1
TPM1P09493 GTF2IP3-201ENST00000433887 494 ntBASIC1.92□□□□□ -2.1
TPM1P09493 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.92□□□□□ -2.1
TPM1P09493 MTATP6P30-201ENST00000443540 664 ntBASIC1.92□□□□□ -2.1
TPM1P09493 MTND1P31-201ENST00000449206 961 ntBASIC1.92□□□□□ -2.1
TPM1P09493 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
TPM1P09493 AC104563.1-201ENST00000476147 376 ntBASIC1.92□□□□□ -2.1
TPM1P09493 AC079203.1-201ENST00000487972 404 ntBASIC1.92□□□□□ -2.1
TPM1P09493 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.92□□□□□ -2.1
TPM1P09493 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.92□□□□□ -2.1
TPM1P09493 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.92□□□□□ -2.1
TPM1P09493 SNORA48.11-201ENST00000517015 89 ntBASIC1.92□□□□□ -2.1
TPM1P09493 AC012213.3-201ENST00000577199 777 ntBASIC1.92□□□□□ -2.1
TPM1P09493 AC231657.1-201ENST00000624313 397 ntBASIC1.92□□□□□ -2.1
TPM1P09493 AC092447.10-201ENST00000620607 1652 ntBASIC1.92□□□□□ -2.1
TPM1P09493 NACAP2-201ENST00000318548 624 ntBASIC1.91□□□□□ -2.1
TPM1P09493 SNORA25B-201ENST00000365507 128 ntBASIC1.91□□□□□ -2.1
TPM1P09493 MIR561-201ENST00000385216 97 ntBASIC1.91□□□□□ -2.1
TPM1P09493 AL139397.2-201ENST00000404529 772 ntBASIC1.91□□□□□ -2.1
TPM1P09493 AL021407.1-201ENST00000404531 386 ntBASIC1.91□□□□□ -2.1
TPM1P09493 MIR1302-8-201ENST00000408342 128 ntBASIC1.91□□□□□ -2.1
TPM1P09493 RN7SKP223-201ENST00000410582 62 ntBASIC1.91□□□□□ -2.1
TPM1P09493 AL353621.1-201ENST00000418219 243 ntBASIC1.91□□□□□ -2.1
TPM1P09493 ISCA1P1-201ENST00000426679 387 ntBASIC1.91□□□□□ -2.1
TPM1P09493 AL139415.2-201ENST00000431968 163 ntBASIC1.91□□□□□ -2.1
TPM1P09493 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.91□□□□□ -2.1
TPM1P09493 FABP5P13-201ENST00000452144 328 ntBASIC1.91□□□□□ -2.1
TPM1P09493 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.91□□□□□ -2.1
TPM1P09493 DEFB130C-202ENST00000530001 230 ntBASIC1.91□□□□□ -2.1
TPM1P09493 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.91□□□□□ -2.1
TPM1P09493 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.91□□□□□ -2.1
TPM1P09493 AL356094.1-201ENST00000624663 1212 ntBASIC1.91□□□□□ -2.1
TPM1P09493 AC006927.2-201ENST00000639256 389 ntBASIC1.91□□□□□ -2.1
TPM1P09493 RNU5B-4P-201ENST00000363508 111 ntBASIC1.9□□□□□ -2.11
TPM1P09493 RNU6-997P-201ENST00000384725 107 ntBASIC1.9□□□□□ -2.11
TPM1P09493 AL603865.2-201ENST00000401679 213 ntBASIC1.9□□□□□ -2.11
TPM1P09493 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.9□□□□□ -2.11
TPM1P09493 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.9□□□□□ -2.11
TPM1P09493 AL353706.1-201ENST00000436728 494 ntBASIC1.9□□□□□ -2.11
TPM1P09493 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.9□□□□□ -2.11
TPM1P09493 AC092001.1-201ENST00000453012 261 ntBASIC1.9□□□□□ -2.11
TPM1P09493 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.9□□□□□ -2.11
TPM1P09493 AC055855.1-201ENST00000489563 579 ntBASIC1.9□□□□□ -2.11
TPM1P09493 RNU6-581P-201ENST00000516214 105 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms