Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNU6-178P-201ENST00000384631 104 ntBASIC4.74□□□□□ -1.65
THBS1P07996 MIR514A1-201ENST00000385133 98 ntBASIC4.74□□□□□ -1.65
THBS1P07996 MIR513C-201ENST00000401352 84 ntBASIC4.74□□□□□ -1.65
THBS1P07996 U3.32-201ENST00000408116 212 ntBASIC4.74□□□□□ -1.65
THBS1P07996 AC108075.1-201ENST00000424692 529 ntBASIC4.74□□□□□ -1.65
THBS1P07996 RPL35AP21-201ENST00000437667 333 ntBASIC4.74□□□□□ -1.65
THBS1P07996 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.74□□□□□ -1.65
THBS1P07996 EIF4A1P11-201ENST00000451239 222 ntBASIC4.74□□□□□ -1.65
THBS1P07996 AC079168.2-201ENST00000453977 416 ntBASIC4.74□□□□□ -1.65
THBS1P07996 AC072052.1-201ENST00000496556 306 ntBASIC4.74□□□□□ -1.65
THBS1P07996 SNORA72.7-201ENST00000516349 94 ntBASIC4.74□□□□□ -1.65
THBS1P07996 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.74□□□□□ -1.65
THBS1P07996 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.74□□□□□ -1.65
THBS1P07996 MIR4782-201ENST00000577987 79 ntBASIC4.74□□□□□ -1.65
THBS1P07996 AP005432.2-201ENST00000608162 586 ntBASIC4.74□□□□□ -1.65
THBS1P07996 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.74□□□□□ -1.65
THBS1P07996 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
THBS1P07996 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
THBS1P07996 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
THBS1P07996 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
THBS1P07996 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
THBS1P07996 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
THBS1P07996 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
THBS1P07996 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
THBS1P07996 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
THBS1P07996 AL109809.4-201ENST00000603520 2185 ntBASIC4.74□□□□□ -1.65
THBS1P07996 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
THBS1P07996 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
THBS1P07996 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
THBS1P07996 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
THBS1P07996 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
THBS1P07996 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
THBS1P07996 AL450326.2-201ENST00000421913 1962 ntBASIC4.73□□□□□ -1.65
THBS1P07996 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.73□□□□□ -1.65
THBS1P07996 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
THBS1P07996 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
THBS1P07996 FTLP6-201ENST00000355274 422 ntBASIC4.73□□□□□ -1.65
THBS1P07996 Y_RNA.71-201ENST00000362892 104 ntBASIC4.73□□□□□ -1.65
THBS1P07996 RNU6-105P-201ENST00000363909 104 ntBASIC4.73□□□□□ -1.65
THBS1P07996 Y_RNA.319-201ENST00000365138 92 ntBASIC4.73□□□□□ -1.65
THBS1P07996 RNU6-80P-201ENST00000384195 107 ntBASIC4.73□□□□□ -1.65
THBS1P07996 RNU6-281P-201ENST00000384212 103 ntBASIC4.73□□□□□ -1.65
THBS1P07996 RNU6-376P-201ENST00000384731 106 ntBASIC4.73□□□□□ -1.65
THBS1P07996 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
THBS1P07996 AL133270.1-201ENST00000402635 279 ntBASIC4.73□□□□□ -1.65
THBS1P07996 RPS27P18-201ENST00000431701 247 ntBASIC4.73□□□□□ -1.65
THBS1P07996 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.73□□□□□ -1.65
THBS1P07996 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.73□□□□□ -1.65
THBS1P07996 AL049874.1-201ENST00000489560 388 ntBASIC4.73□□□□□ -1.65
THBS1P07996 AC139453.3-201ENST00000493276 369 ntBASIC4.73□□□□□ -1.65
THBS1P07996 AC073073.1-201ENST00000493920 463 ntBASIC4.73□□□□□ -1.65
THBS1P07996 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.73□□□□□ -1.65
THBS1P07996 RNA5SP165-201ENST00000517142 115 ntBASIC4.73□□□□□ -1.65
THBS1P07996 SUMO2P18-201ENST00000518873 252 ntBASIC4.73□□□□□ -1.65
THBS1P07996 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.73□□□□□ -1.65
THBS1P07996 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.73□□□□□ -1.65
THBS1P07996 HMGN2P6-201ENST00000551091 273 ntBASIC4.73□□□□□ -1.65
THBS1P07996 AL121603.1-201ENST00000553815 142 ntBASIC4.73□□□□□ -1.65
THBS1P07996 AL391261.3-201ENST00000557194 520 ntBASIC4.73□□□□□ -1.65
THBS1P07996 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.73□□□□□ -1.65
THBS1P07996 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.73□□□□□ -1.65
THBS1P07996 AL590392.1-201ENST00000604960 446 ntBASIC4.73□□□□□ -1.65
THBS1P07996 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.73□□□□□ -1.65
THBS1P07996 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.73□□□□□ -1.65
THBS1P07996 snoU18.1-201ENST00000629629 71 ntBASIC4.73□□□□□ -1.65
THBS1P07996 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
THBS1P07996 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
THBS1P07996 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
THBS1P07996 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
THBS1P07996 AL359693.1-201ENST00000614959 2407 ntBASIC4.73□□□□□ -1.65
THBS1P07996 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
THBS1P07996 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
THBS1P07996 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
THBS1P07996 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
THBS1P07996 AC092593.1-201ENST00000515413 1815 ntBASIC4.72□□□□□ -1.65
THBS1P07996 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
THBS1P07996 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
THBS1P07996 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
THBS1P07996 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
THBS1P07996 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
THBS1P07996 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
THBS1P07996 DEFB108F-201ENST00000344638 222 ntBASIC4.72□□□□□ -1.65
THBS1P07996 U8.4-201ENST00000363626 134 ntBASIC4.72□□□□□ -1.65
THBS1P07996 SNORA2.3-201ENST00000383920 135 ntBASIC4.72□□□□□ -1.65
THBS1P07996 RNU6-1074P-201ENST00000383995 104 ntBASIC4.72□□□□□ -1.65
THBS1P07996 RNU6-1145P-201ENST00000384246 107 ntBASIC4.72□□□□□ -1.65
THBS1P07996 MIR600-201ENST00000385007 98 ntBASIC4.72□□□□□ -1.65
THBS1P07996 MIR765-201ENST00000390226 114 ntBASIC4.72□□□□□ -1.65
THBS1P07996 RNU2-2P-201ENST00000410396 191 ntBASIC4.72□□□□□ -1.65
THBS1P07996 RNU2-52P-201ENST00000410680 190 ntBASIC4.72□□□□□ -1.65
THBS1P07996 EBAG9P1-201ENST00000418955 543 ntBASIC4.72□□□□□ -1.65
THBS1P07996 COX6B1P7-201ENST00000430845 235 ntBASIC4.72□□□□□ -1.65
THBS1P07996 CR769767.1-201ENST00000436337 346 ntBASIC4.72□□□□□ -1.65
THBS1P07996 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.72□□□□□ -1.65
THBS1P07996 RPL7AP61-201ENST00000443410 636 ntBASIC4.72□□□□□ -1.65
THBS1P07996 SCARNA15.2-201ENST00000516409 127 ntBASIC4.72□□□□□ -1.65
THBS1P07996 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.72□□□□□ -1.65
THBS1P07996 AL390726.5-202ENST00000564800 256 ntBASIC4.72□□□□□ -1.65
THBS1P07996 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.72□□□□□ -1.65
THBS1P07996 MIR5695-201ENST00000579717 85 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms