Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
RAPGEF3O95398 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RAPGEF3O95398 SDAD1P2-201ENST00000441308 2028 ntBASIC4.65□□□□□ -1.67
RAPGEF3O95398 AL157700.1-201ENST00000561973 1432 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAPGEF3O95398 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAPGEF3O95398 RNU6-552P-201ENST00000362869 119 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 SNORA51.2-201ENST00000364595 132 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 RHOT1P2-201ENST00000366423 333 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAPGEF3O95398 SNORD37.1-201ENST00000390968 65 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 RNU6-903P-201ENST00000391270 109 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 MIR887-201ENST00000401258 79 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 AL356968.1-201ENST00000416622 474 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 CALM2P2-201ENST00000428512 440 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 AC024082.2-201ENST00000434771 238 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 RPS24P6-201ENST00000452670 400 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 AC090543.2-201ENST00000483963 348 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 RPL23AP55-201ENST00000498163 452 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 MLLT10P2-201ENST00000506434 249 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RAPGEF3O95398 RNU4-29P-201ENST00000515943 174 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 RNU6-840P-201ENST00000517275 65 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 MIR4524B-201ENST00000581569 115 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 AC009994.1-201ENST00000606889 253 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 uc_338.32-201ENST00000615087 172 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 AC010133.1-201ENST00000615809 842 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 AF117829.1-206ENST00000621883 3802 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RAPGEF3O95398 AC017071.1-201ENST00000564407 2204 ntBASIC4.64□□□□□ -1.67
RAPGEF3O95398 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
RAPGEF3O95398 AL354685.2-201ENST00000448218 1447 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 API5P2-201ENST00000397055 1498 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 SNORD115-7-201ENST00000365306 82 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 SNORA70B-201ENST00000384210 135 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 NDUFS5P1-201ENST00000405668 289 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 RNU2-52P-201ENST00000410680 190 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 BMS1P22-201ENST00000414726 313 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 OR6C66P-201ENST00000414917 930 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC114491.1-201ENST00000416095 246 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 AL645937.1-202ENST00000421799 937 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 RPL26P6-201ENST00000440913 438 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 RPL23AP67-201ENST00000465341 474 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC010285.1-201ENST00000470580 392 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 RPS4XP22-201ENST00000480755 780 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 HMGB1P22-201ENST00000505315 124 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC092436.1-201ENST00000506450 503 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC108078.2-201ENST00000510750 236 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 RNU6-507P-201ENST00000516045 100 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 RN7SKP272-201ENST00000516988 232 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 FAM60BP-201ENST00000578364 658 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 MIR4425-201ENST00000580572 84 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC069234.5-201ENST00000611056 416 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 Y_RNA.804-201ENST00000615262 101 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 AL589994.2-201ENST00000621124 579 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AL360181.4-201ENST00000621752 134 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 AC010338.1-201ENST00000621823 717 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RAPGEF3O95398 ASNSP3-201ENST00000451989 1306 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 MTND4P14-201ENST00000435799 1354 ntBASIC4.63□□□□□ -1.67
RAPGEF3O95398 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RAPGEF3O95398 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAPGEF3O95398 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.62□□□□□ -1.67
RAPGEF3O95398 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
RAPGEF3O95398 SNORD74.4-201ENST00000364129 80 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 SMIM11P1-201ENST00000369586 178 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 RNU6-946P-201ENST00000383878 107 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 RNU6-767P-201ENST00000384132 107 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.62□□□□□ -1.67
RAPGEF3O95398 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.62□□□□□ -1.67
RAPGEF3O95398 AC009161.1-201ENST00000417306 376 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 AC003685.2-201ENST00000422795 395 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 DUTP6-201ENST00000425573 462 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.62□□□□□ -1.67
RAPGEF3O95398 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.62□□□□□ -1.67
RAPGEF3O95398 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.62□□□□□ -1.67
RAPGEF3O95398 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.62□□□□□ -1.67
RAPGEF3O95398 RPL23AP84-201ENST00000571193 464 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms