Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
NDUFA1O15239 RNA5SP391-201ENST00000363456 119 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 SNORA4.1-201ENST00000364263 144 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.15□□□□□ -2.39
NDUFA1O15239 RNU6-348P-201ENST00000384386 107 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 RNU6-748P-201ENST00000384648 107 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 Z86062.1-201ENST00000406773 777 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.15□□□□□ -2.39
NDUFA1O15239 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.15□□□□□ -2.39
NDUFA1O15239 Y_RNA.638-201ENST00000459374 113 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 AC114982.1-201ENST00000469402 321 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 HMGN2P9-201ENST00000476875 229 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 OR52A4P-202ENST00000481634 799 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.15□□□□□ -2.39
NDUFA1O15239 AC133963.2-201ENST00000513686 578 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 RNA5SP121-201ENST00000516537 101 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.15□□□□□ -2.39
NDUFA1O15239 AL137100.2-201ENST00000555786 315 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 AL359212.1-201ENST00000556608 614 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.15□□□□□ -2.39
NDUFA1O15239 AL078603.1-201ENST00000603824 313 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 AC007620.3-201ENST00000608131 497 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 AC090517.3-201ENST00000625170 141 ntBASIC0.15□□□□□ -2.39
NDUFA1O15239 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.14□□□□□ -2.39
NDUFA1O15239 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
NDUFA1O15239 Y_RNA.4-201ENST00000362333 112 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 RNU1-133P-201ENST00000364867 167 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.14□□□□□ -2.39
NDUFA1O15239 MIR506-201ENST00000384998 124 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 RPL21P1-201ENST00000399532 476 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 NDUFB4P7-201ENST00000423198 363 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.14□□□□□ -2.39
NDUFA1O15239 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.14□□□□□ -2.39
NDUFA1O15239 RPL31P3-201ENST00000458430 332 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 RNA5SP57-201ENST00000459463 123 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.14□□□□□ -2.39
NDUFA1O15239 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.14□□□□□ -2.39
NDUFA1O15239 IGKV2D-36-201ENST00000518643 226 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.14□□□□□ -2.39
NDUFA1O15239 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.14□□□□□ -2.39
NDUFA1O15239 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.14□□□□□ -2.39
NDUFA1O15239 U4atac.1-201ENST00000618345 95 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.14□□□□□ -2.39
NDUFA1O15239 MIR3199-2-201ENST00000636243 86 ntBASIC0.14□□□□□ -2.39
NDUFA1O15239 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
NDUFA1O15239 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.13□□□□□ -2.39
NDUFA1O15239 RNU5D-1-201ENST00000363299 116 ntBASIC0.13□□□□□ -2.39
NDUFA1O15239 Y_RNA.224-201ENST00000364308 111 ntBASIC0.13□□□□□ -2.39
NDUFA1O15239 MIR493-201ENST00000385254 89 ntBASIC0.13□□□□□ -2.39
NDUFA1O15239 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
NDUFA1O15239 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
NDUFA1O15239 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.13□□□□□ -2.39
NDUFA1O15239 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.13□□□□□ -2.39
NDUFA1O15239 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.13□□□□□ -2.39
NDUFA1O15239 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.13□□□□□ -2.39
NDUFA1O15239 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.13□□□□□ -2.39
NDUFA1O15239 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.13□□□□□ -2.39
NDUFA1O15239 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.13□□□□□ -2.39
NDUFA1O15239 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.13□□□□□ -2.39
NDUFA1O15239 SNORD116-28-201ENST00000516123 91 ntBASIC0.13□□□□□ -2.39
NDUFA1O15239 RNU6-197P-201ENST00000516680 100 ntBASIC0.13□□□□□ -2.39
NDUFA1O15239 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.13□□□□□ -2.39
NDUFA1O15239 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.13□□□□□ -2.39
NDUFA1O15239 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.13□□□□□ -2.39
NDUFA1O15239 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.13□□□□□ -2.39
NDUFA1O15239 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.13□□□□□ -2.39
NDUFA1O15239 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.13□□□□□ -2.39
NDUFA1O15239 AL138478.1-201ENST00000612252 832 ntBASIC0.13□□□□□ -2.39
NDUFA1O15239 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.13□□□□□ -2.39
NDUFA1O15239 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
NDUFA1O15239 AL118508.4-201ENST00000624142 1176 ntBASIC0.13□□□□□ -2.39
NDUFA1O15239 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.12□□□□□ -2.39
NDUFA1O15239 RNA5SP432-201ENST00000362480 116 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 Y_RNA.164-201ENST00000363709 102 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.12□□□□□ -2.39
NDUFA1O15239 RNU6-968P-201ENST00000384076 107 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 MIR608-201ENST00000384820 100 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 MIR499A-201ENST00000384903 122 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 MIR518A2-201ENST00000384966 87 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 AL589994.1-201ENST00000404962 340 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 AC009310.1-201ENST00000414414 451 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 PNRC2P1-201ENST00000423940 420 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 VN1R42P-201ENST00000424651 344 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.12□□□□□ -2.39
NDUFA1O15239 AC244505.3-201ENST00000454598 187 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 snoU13.28-201ENST00000459235 104 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.12□□□□□ -2.39
NDUFA1O15239 MTND2P26-201ENST00000528255 1029 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.12□□□□□ -2.39
NDUFA1O15239 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.12□□□□□ -2.39
NDUFA1O15239 RAB11AP2-201ENST00000545905 639 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.12□□□□□ -2.39
NDUFA1O15239 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.12□□□□□ -2.39
NDUFA1O15239 MIR4711-201ENST00000578274 70 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 AL391646.1-201ENST00000603860 190 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 MIR6864-201ENST00000617935 70 ntBASIC0.12□□□□□ -2.39
NDUFA1O15239 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
NDUFA1O15239 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
NDUFA1O15239 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms