Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC117503.1-201ENST00000472241 394 ntBASIC0.54□□□□□ -2.32
COL6A5A8TX70 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.54□□□□□ -2.32
COL6A5A8TX70 RNU6-496P-201ENST00000516145 99 ntBASIC0.54□□□□□ -2.32
COL6A5A8TX70 RNU6-970P-201ENST00000516312 107 ntBASIC0.54□□□□□ -2.32
COL6A5A8TX70 SNORA31.25-201ENST00000517242 134 ntBASIC0.54□□□□□ -2.32
COL6A5A8TX70 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.54□□□□□ -2.32
COL6A5A8TX70 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.54□□□□□ -2.32
COL6A5A8TX70 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
COL6A5A8TX70 RNY3P5-201ENST00000384127 102 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AL161449.1-201ENST00000414531 1199 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 ARL2BPP3-201ENST00000421226 480 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 RPL21P103-201ENST00000479921 488 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AC117454.1-201ENST00000491120 168 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 RNU2-19P-201ENST00000517288 84 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.53□□□□□ -2.32
COL6A5A8TX70 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.53□□□□□ -2.32
COL6A5A8TX70 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.53□□□□□ -2.32
COL6A5A8TX70 AP001180.6-201ENST00000584918 159 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AL139344.1-201ENST00000605228 195 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AC009974.1-201ENST00000608881 455 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.53□□□□□ -2.32
COL6A5A8TX70 RNU6-989P-201ENST00000362756 107 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 Y_RNA.568-201ENST00000384742 113 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 MIR153-1-201ENST00000384914 90 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AC010099.3-201ENST00000423896 409 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 NF1P3-201ENST00000457709 450 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.53□□□□□ -2.32
COL6A5A8TX70 MTATP6P22-201ENST00000507369 598 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 SNORA62.5-201ENST00000516634 120 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 RNU6-889P-201ENST00000517189 103 ntBASIC0.53□□□□□ -2.32
COL6A5A8TX70 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.53□□□□□ -2.32
COL6A5A8TX70 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.53□□□□□ -2.32
COL6A5A8TX70 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
COL6A5A8TX70 RNA5SP450-201ENST00000411206 102 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 RPL30P13-201ENST00000418873 348 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AC010099.1-201ENST00000455434 375 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.52□□□□□ -2.33
COL6A5A8TX70 RNU6-928P-201ENST00000516876 104 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.52□□□□□ -2.33
COL6A5A8TX70 AC025594.3-201ENST00000613068 790 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 MIR365A-201ENST00000362260 87 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 Y_RNA.352-201ENST00000365439 102 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AL512604.1-201ENST00000404812 257 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AL591043.1-201ENST00000432461 424 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 RPS27AP8-201ENST00000452665 445 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.52□□□□□ -2.33
COL6A5A8TX70 AC005741.1-201ENST00000511094 432 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AC084033.1-201ENST00000550830 633 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AC024060.1-201ENST00000607052 494 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AL138880.2-201ENST00000616214 239 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 AC068787.1-201ENST00000623908 691 ntBASIC0.52□□□□□ -2.33
COL6A5A8TX70 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.52□□□□□ -2.33
COL6A5A8TX70 Y_RNA.146-201ENST00000363549 102 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 SNORA38-201ENST00000363946 132 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AL022238.1-201ENST00000442557 355 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC055731.1-201ENST00000474387 401 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AL355812.1-201ENST00000603215 216 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
COL6A5A8TX70 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
COL6A5A8TX70 MIR101-1-201ENST00000362265 75 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 RNU6-1164P-201ENST00000364428 107 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC087884.1-201ENST00000469738 328 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AP003355.1-201ENST00000518956 587 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC078899.2-201ENST00000595282 212 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 SNORD115-41-201ENST00000363608 82 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 RNU4-65P-201ENST00000410473 140 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 RPS25P9-201ENST00000435591 252 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC009296.1-201ENST00000443146 155 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 RPL30P11-201ENST00000495304 339 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 LINC00557-201ENST00000563184 1279 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 MIR4698-201ENST00000577795 80 ntBASIC0.51□□□□□ -2.33
COL6A5A8TX70 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.51□□□□□ -2.33
COL6A5A8TX70 AP001350.1-201ENST00000601906 1524 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.5□□□□□ -2.33
COL6A5A8TX70 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
COL6A5A8TX70 MIR676-201ENST00000390702 67 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 RNA5SP105-201ENST00000391123 113 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 VN1R36P-201ENST00000414936 291 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AC244098.2-201ENST00000422068 99 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 Z80107.1-201ENST00000436830 412 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AC118469.1-201ENST00000442943 488 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 AL031183.1-201ENST00000457667 207 ntBASIC0.5□□□□□ -2.33
COL6A5A8TX70 CABYRP1-201ENST00000465493 1045 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms