Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC069307.1-201ENST00000602820 447 ntBASIC4.8□□□□□ -1.64
GPC6Q9Y625 AC099506.2-201ENST00000623074 221 ntBASIC4.8□□□□□ -1.64
GPC6Q9Y625 SCARNA4-201ENST00000629045 128 ntBASIC4.8□□□□□ -1.64
GPC6Q9Y625 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
GPC6Q9Y625 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC6Q9Y625 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
GPC6Q9Y625 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
GPC6Q9Y625 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
GPC6Q9Y625 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC6Q9Y625 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC6Q9Y625 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC6Q9Y625 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC6Q9Y625 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC6Q9Y625 Y_RNA.233-201ENST00000364407 101 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 RNU6-1035P-201ENST00000384477 107 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 MIR1286-201ENST00000408112 78 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 RNU2-68P-201ENST00000410878 191 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 AC108075.1-201ENST00000424692 529 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 RPS29P10-201ENST00000439197 166 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 AC087477.1-201ENST00000465747 340 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 AC010285.1-201ENST00000470580 392 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 RPS21P4-201ENST00000487122 248 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 RNY3P16-201ENST00000516338 101 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 RNA5SP291-201ENST00000517222 105 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 IGKV2-38-201ENST00000517443 247 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC6Q9Y625 AC027288.2-201ENST00000553028 243 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 uc_338.18-201ENST00000615451 175 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 IGHVIII-44-202ENST00000636235 289 ntBASIC4.79□□□□□ -1.64
GPC6Q9Y625 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.79□□□□□ -1.64
GPC6Q9Y625 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GPC6Q9Y625 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC6Q9Y625 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC6Q9Y625 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC116096.1-201ENST00000566804 2314 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC004925.1-201ENST00000624256 2706 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC6Q9Y625 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC6Q9Y625 Y_RNA.398-201ENST00000383952 99 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 RNU6-17P-201ENST00000384245 107 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 RNU6-18P-201ENST00000384527 107 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC016769.2-201ENST00000414815 475 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AL139148.1-201ENST00000427122 680 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 CYCSP32-201ENST00000440548 321 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC107016.1-201ENST00000550463 337 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 MED28P6-201ENST00000558776 231 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 MIR3144-201ENST00000579460 79 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC007448.1-201ENST00000582714 234 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC105254.2-201ENST00000603636 436 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC109309.2-201ENST00000612597 332 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 AL590240.4-201ENST00000616908 390 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 AC241585.2-209ENST00000638217 143 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 MAPK10-304ENST00000641341 3984 ntBASIC4.78□□□□□ -1.64
GPC6Q9Y625 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
GPC6Q9Y625 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC6Q9Y625 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
GPC6Q9Y625 AC008725.1-201ENST00000605123 2263 ntBASIC4.77□□□□□ -1.65
GPC6Q9Y625 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GPC6Q9Y625 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GPC6Q9Y625 AL133243.3-201ENST00000617415 3004 ntBASIC4.77□□□□□ -1.65
GPC6Q9Y625 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GPC6Q9Y625 SNORA51.1-201ENST00000363243 140 ntBASIC4.77□□□□□ -1.65
GPC6Q9Y625 RNU6-105P-201ENST00000363909 104 ntBASIC4.77□□□□□ -1.65
GPC6Q9Y625 Y_RNA.275-201ENST00000364726 110 ntBASIC4.77□□□□□ -1.65
GPC6Q9Y625 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GPC6Q9Y625 RNY1P5-201ENST00000383890 115 ntBASIC4.77□□□□□ -1.65
GPC6Q9Y625 COX6CP13-201ENST00000428703 226 ntBASIC4.77□□□□□ -1.65
GPC6Q9Y625 AL356867.1-201ENST00000429623 299 ntBASIC4.77□□□□□ -1.65
GPC6Q9Y625 RPL35AP21-201ENST00000437667 333 ntBASIC4.77□□□□□ -1.65
GPC6Q9Y625 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms