Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SNORA40.9-201ENST00000515895 93 ntBASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 MIR4436B2-201ENST00000581415 91 ntBASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 MIR4436B1-201ENST00000583272 91 ntBASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 AC024153.1-201ENST00000603103 365 ntBASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 AC024581.2-201ENST00000619986 252 ntBASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.84□□□□□ -1.63
HRH3Q9Y5N1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HRH3Q9Y5N1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HRH3Q9Y5N1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HRH3Q9Y5N1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HRH3Q9Y5N1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HRH3Q9Y5N1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 AC007390.2-201ENST00000606229 3803 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 AL445487.1-201ENST00000415694 1580 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 RNA5SP305-201ENST00000362665 119 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 MIR105-1-201ENST00000385222 81 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 U3.36-201ENST00000408418 213 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 Y_RNA.625-201ENST00000411256 107 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 AC073850.1-201ENST00000449243 255 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 SSXP4-201ENST00000451349 245 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 SNORA43.2-201ENST00000516652 128 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 AC016256.1-201ENST00000547971 354 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 MIR5692C2-201ENST00000577959 77 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 MIR4646-201ENST00000580775 63 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 MIR6748-201ENST00000610433 71 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 AL139811.1-201ENST00000424779 2299 ntBASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.83□□□□□ -1.64
HRH3Q9Y5N1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 NEAT1-202ENST00000501122 22743 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 U3.3-201ENST00000362986 216 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 Y_RNA.357-201ENST00000365487 109 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 UBBP2-201ENST00000376781 231 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 Y_RNA.400-201ENST00000383963 111 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 RNU6-281P-201ENST00000384212 103 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 MIR10B-201ENST00000385011 110 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AL133270.1-201ENST00000402635 279 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 MTHFD2P2-201ENST00000407725 247 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AC140059.1-201ENST00000489238 361 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 RPS23P1-201ENST00000491662 432 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AF186996.7-201ENST00000492781 209 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AC107918.3-201ENST00000533272 382 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 MED28P6-201ENST00000558776 231 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 BPIFA4P-203ENST00000603168 689 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 RNA5SP108-201ENST00000605921 117 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AC006065.5-201ENST00000623427 349 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AP002799.1-201ENST00000623552 423 ntBASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HRH3Q9Y5N1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AC000123.3-201ENST00000624029 4975 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms