Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 AC087477.1-201ENST00000465747 340 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 AP000870.1-201ENST00000472927 406 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 NIP7P2-201ENST00000485801 544 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 Y_RNA.679-201ENST00000516416 91 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-703P-201ENST00000516946 107 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 RNU6-1183P-201ENST00000517054 60 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 RPL21P7-201ENST00000557463 483 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 AL590392.1-201ENST00000604960 446 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 RPSAP73-201ENST00000614820 330 ntBASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA11Q9Y5H2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA11Q9Y5H2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA11Q9Y5H2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA11Q9Y5H2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA11Q9Y5H2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PCDHGA11Q9Y5H2 SNORA25.1-201ENST00000362326 128 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 U3.2-201ENST00000362981 210 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 Y_RNA.292-201ENST00000364904 97 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AL078599.1-201ENST00000402075 293 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 U3.32-201ENST00000408116 212 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC092047.1-201ENST00000424997 240 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 TMSB4XP3-201ENST00000445144 114 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 MTATP6P7-201ENST00000453315 681 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC009127.1-201ENST00000467090 155 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL23AP65-201ENST00000475608 468 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC109925.1-201ENST00000478069 331 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC073073.1-201ENST00000493920 463 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU7-110P-201ENST00000516891 62 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-1198P-201ENST00000516904 67 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC016256.1-201ENST00000547971 354 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC051619.2-201ENST00000559063 397 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC007225.2-201ENST00000562529 256 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 CYCSP39-201ENST00000565821 309 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AP005432.2-201ENST00000608162 586 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 MIR6768-201ENST00000610734 72 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA11Q9Y5H2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-682P-201ENST00000363843 106 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-740P-201ENST00000364734 105 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 Y_RNA.590-201ENST00000410140 107 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-1140P-201ENST00000410517 106 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL7AP61-201ENST00000443410 636 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AURKAPS2-201ENST00000454983 333 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AL591473.1-201ENST00000464297 313 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-1278P-201ENST00000516130 107 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 RN7SKP49-201ENST00000516675 260 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-861P-201ENST00000516745 106 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AC090281.1-201ENST00000523019 276 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AC005296.1-201ENST00000616145 209 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 AL592182.3-201ENST00000642132 3304 ntBASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA11Q9Y5H2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 MARK2P15-201ENST00000432204 2186 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms