Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 U3.19-201ENST00000390893 196 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC092809.3-201ENST00000415453 231 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 TMEM167AP1-201ENST00000423409 219 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC007919.1-201ENST00000429380 217 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.75□□□□□ -1.81
COL20A1Q9P218 NDUFB4P6-201ENST00000436819 366 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC008264.1-201ENST00000447612 367 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC104058.1-201ENST00000448028 297 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.75□□□□□ -1.81
COL20A1Q9P218 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL20A1Q9P218 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.75□□□□□ -1.81
COL20A1Q9P218 MIR2276-201ENST00000516886 89 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 MTND4P7-201ENST00000523876 130 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AL137161.1-201ENST00000532231 390 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 BNIP3P6-201ENST00000549284 499 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 TRAV28-201ENST00000557548 323 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AL138976.2-201ENST00000563989 694 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC011471.1-201ENST00000585766 187 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC010338.1-201ENST00000621823 717 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.75□□□□□ -1.81
COL20A1Q9P218 DUXAP9-208ENST00000622815 614 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 AC009033.1-201ENST00000624279 431 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL20A1Q9P218 CASC19-280ENST00000642102 1351 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL20A1Q9P218 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
COL20A1Q9P218 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL20A1Q9P218 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
COL20A1Q9P218 Y_RNA.245-201ENST00000364493 95 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 MIR301A-201ENST00000385261 86 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 RNU6-876P-201ENST00000391295 104 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 CISD1P1-201ENST00000393907 327 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 U3.42-201ENST00000408746 214 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.74□□□□□ -1.81
COL20A1Q9P218 Y_RNA.604-201ENST00000410574 102 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 Z92545.1-201ENST00000411782 234 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 AC126124.2-201ENST00000413542 321 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 YPEL5P1-201ENST00000419731 367 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 AL671855.1-201ENST00000446875 1203 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 RPL9P32-201ENST00000464118 620 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.74□□□□□ -1.81
COL20A1Q9P218 TTC39CP1-201ENST00000512513 755 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 RNU6-914P-201ENST00000516749 109 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 RNA5SP290-201ENST00000517133 127 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 HIGD1AP1-201ENST00000550979 275 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.74□□□□□ -1.81
COL20A1Q9P218 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
COL20A1Q9P218 AC010525.2-201ENST00000590920 195 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 AL161798.1-201ENST00000604630 131 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 AC073657.2-201ENST00000605661 303 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL20A1Q9P218 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.74□□□□□ -1.81
COL20A1Q9P218 RMST_3.1-201ENST00000611651 109 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 uc_338.34-201ENST00000617467 174 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 AP003122.6-201ENST00000623831 495 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.74□□□□□ -1.81
COL20A1Q9P218 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.74□□□□□ -1.81
COL20A1Q9P218 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
COL20A1Q9P218 FAM35BP-202ENST00000497389 3337 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC002546.1-201ENST00000588041 2504 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL20A1Q9P218 RNU6-512P-201ENST00000364438 103 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 RNU4-66P-201ENST00000365199 138 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL20A1Q9P218 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL20A1Q9P218 AL139397.2-201ENST00000404529 772 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 RNA5SP229-201ENST00000410809 99 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC022028.1-201ENST00000412054 408 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 AL353705.1-201ENST00000433468 480 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 Z82210.1-201ENST00000440037 231 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 PIGFP3-201ENST00000441918 722 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 MTND3P16-201ENST00000452205 344 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 RNU7-180P-201ENST00000459240 63 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 RPS29P2-201ENST00000479278 136 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC006445.1-201ENST00000491925 405 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 LRRC34P2-201ENST00000514850 553 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 RNU6-1282P-201ENST00000516735 96 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC106782.4-201ENST00000568264 210 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL20A1Q9P218 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.73□□□□□ -1.81
COL20A1Q9P218 MIR15A-201ENST00000607334 83 ntBASIC3.73□□□□□ -1.81
COL20A1Q9P218 AL390240.1-201ENST00000612950 384 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms