Protein–RNA interactions for Protein: Q9NYG2

ZDHHC3, Palmitoyltransferase ZDHHC3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3Q9NYG2 AC140479.3-201ENST00000418944 1126 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 RPL17P36-201ENST00000420302 549 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 CYP4F29P-201ENST00000420685 446 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 Y_RNA.650-201ENST00000459002 102 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 AP001025.1-201ENST00000486139 332 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 AC091959.1-201ENST00000495857 238 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 AC010265.1-201ENST00000513509 211 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 RNY3P16-201ENST00000516338 101 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 Y_RNA.777-201ENST00000516982 102 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 RNA5SP165-201ENST00000517142 115 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 AC027308.1-201ENST00000517993 110 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 MIR4282-201ENST00000583613 67 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 Y_RNA.771-201ENST00000598668 102 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 RMST_6.1-201ENST00000611980 203 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 Y_RNA.789-201ENST00000622480 102 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 CR381572.2-201ENST00000624852 397 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 IGHVIII-44-202ENST00000636235 289 ntBASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZDHHC3Q9NYG2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 RNU6-527P-201ENST00000363425 104 ntBASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 RNU6-1289P-201ENST00000384431 106 ntBASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 RNU2-51P-201ENST00000410708 197 ntBASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 RPL23AP49-201ENST00000492925 468 ntBASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 RNU6-1114P-201ENST00000516022 107 ntBASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 RNA5SP249-201ENST00000516127 99 ntBASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 RPL23AP88-201ENST00000605759 454 ntBASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 AC015914.2-201ENST00000618167 288 ntBASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 AL022401.1-201ENST00000619498 108 ntBASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZDHHC3Q9NYG2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 RNU6-105P-201ENST00000363909 104 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 SNORA74A-201ENST00000364089 198 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 RNU6-541P-201ENST00000384709 110 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 MIR153-2-201ENST00000385225 87 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 RAB9AP3-201ENST00000412737 573 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 CYCSP32-201ENST00000440548 321 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 RAB9AP1-201ENST00000449393 573 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 RN7SL558P-201ENST00000497468 299 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 RNU6-1219P-201ENST00000516143 112 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 RNU4-60P-201ENST00000517239 135 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 RNU6-709P-201ENST00000517257 104 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 AC107918.3-201ENST00000533272 382 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 AK6P2-201ENST00000549020 471 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 CYCSP40-201ENST00000575927 294 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 SCARNA4-202ENST00000625402 129 ntBASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.81□□□□□ -1.64
ZDHHC3Q9NYG2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZDHHC3Q9NYG2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZDHHC3Q9NYG2 AL450326.2-201ENST00000421913 1962 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms