Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HCFC1R1Q9NWW0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 GABRG2-229ENST00000641017 3628 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 OR5J1P-201ENST00000313544 939 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 MIR30E-201ENST00000362104 92 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 Y_RNA.248-201ENST00000364501 109 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 RNU4-12P-201ENST00000365233 139 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 RNU6-169P-201ENST00000365336 107 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 Y_RNA.372-201ENST00000365599 102 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 SNORD15B-201ENST00000384714 146 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 MTCO3P40-201ENST00000392516 676 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AL031121.1-201ENST00000406553 254 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 BTF3P7-201ENST00000407097 488 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 MTND3P17-201ENST00000416968 344 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AC073464.1-201ENST00000429823 534 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 MRPS31P2-201ENST00000451581 518 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 RN7SL330P-201ENST00000469709 307 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 RPS29P26-201ENST00000477483 171 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AC233702.1-201ENST00000482905 502 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AC007182.2-201ENST00000489251 402 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 RPL39P36-201ENST00000490784 156 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 HMGB1P29-201ENST00000505659 499 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 RNU6-677P-201ENST00000516914 101 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 RNU6-143P-201ENST00000516942 93 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 RNU6-1220P-201ENST00000517126 108 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 FAM92A1P1-201ENST00000528023 890 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AC092954.2-201ENST00000609103 430 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC1R1Q9NWW0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 RNU6-799P-201ENST00000363567 107 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 RNU6-282P-201ENST00000365357 103 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 RNU6-641P-201ENST00000384006 107 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 MIR558-201ENST00000384920 94 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 SNORD115-47-201ENST00000391226 86 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 UBE2V1P2-201ENST00000397758 440 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 RPS12P24-201ENST00000412619 387 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 USP9YP18-201ENST00000425912 695 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 MED13P1-201ENST00000428342 171 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AL596276.1-201ENST00000434465 418 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AL714022.1-201ENST00000439897 151 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 RPL21P8-201ENST00000465083 535 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AL121769.1-201ENST00000469473 401 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 ARL4AP2-201ENST00000507378 601 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 SNORA31.21-201ENST00000517180 77 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 H3F3AP1-201ENST00000559984 334 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC234778.2-201ENST00000566241 354 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC092325.1-201ENST00000566449 554 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AL133393.1-201ENST00000603277 287 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC174048.1-201ENST00000603389 144 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 BNIP3P9-201ENST00000603714 553 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AL136363.1-201ENST00000605349 337 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC004852.3-201ENST00000614131 326 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AL359880.1-201ENST00000621879 266 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 MTND5P42-201ENST00000637720 498 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 MIR622-201ENST00000638396 96 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AL359693.1-201ENST00000614959 2407 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC058791.1-201ENST00000608412 3198 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 AC103988.1-201ENST00000566382 2177 ntBASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1R1Q9NWW0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 Y_RNA.1-201ENST00000352915 104 ntBASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 RNU6-884P-201ENST00000363889 107 ntBASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 CALM2P3-201ENST00000400429 449 ntBASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 AL590002.1-201ENST00000406554 418 ntBASIC3.24□□□□□ -1.89
HCFC1R1Q9NWW0 RNU2-39P-201ENST00000410604 198 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms