Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 VDAC1P3-201ENST00000434069 851 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 PSMD10P3-201ENST00000437000 448 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AC022493.1-201ENST00000492984 337 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AC021006.3-201ENST00000530771 192 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 MIR1273C-201ENST00000578669 77 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 MIR4330-201ENST00000579077 105 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 MIR4480-201ENST00000582492 71 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-6P-201ENST00000606623 107 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AP002826.1-201ENST00000608835 315 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AC099506.2-201ENST00000623074 221 ntBASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.07□□□□□ -1.6
CUEDC1Q9NWM3 Z95331.1-201ENST00000623075 23112 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AC063976.2-201ENST00000425667 3556 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AC233981.2-201ENST00000611524 1614 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 RNU5B-2P-201ENST00000363036 113 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 OR1L6-202ENST00000373684 1044 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 MIR589-201ENST00000385238 99 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 RPL23AP26-201ENST00000412728 464 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 CR769767.1-201ENST00000436337 346 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 UQCRBP2-201ENST00000447827 297 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AL389915.2-201ENST00000454576 441 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 RN7SL814P-201ENST00000487715 300 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AC006116.3-201ENST00000592968 361 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AC008814.1-201ENST00000603797 406 ntBASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CUEDC1Q9NWM3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 DEFB108F-201ENST00000344638 222 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-50P-201ENST00000362356 103 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 Y_RNA.23-201ENST00000362496 106 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-227P-201ENST00000362865 103 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 U3.3-201ENST00000362986 216 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 RNU1-43P-201ENST00000365052 165 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-395P-201ENST00000365662 106 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 MIR301A-201ENST00000385261 86 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 SNORA40-201ENST00000388090 126 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 RNU4-30P-201ENST00000410245 143 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 CRYBB2P1-203ENST00000415709 538 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 RPS29P27-201ENST00000463711 170 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 ENPP7P11-201ENST00000505915 627 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 SNORD116-25-201ENST00000516517 92 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-1315P-201ENST00000517187 99 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 AC084757.4-201ENST00000616350 526 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 MIR6839-201ENST00000620425 113 ntBASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.05□□□□□ -1.6
CUEDC1Q9NWM3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 RNU6-1298P-201ENST00000362456 101 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 RNU4-9P-201ENST00000364951 139 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 RN7SKP153-201ENST00000365026 316 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 MIR569-201ENST00000385228 96 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AL357139.1-201ENST00000407792 426 ntBASIC5.04□□□□□ -1.6
CUEDC1Q9NWM3 AC093162.1-201ENST00000419682 124 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms