Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
EFCC1Q9HA90 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
EFCC1Q9HA90 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
EFCC1Q9HA90 AC011266.1-201ENST00000624119 3569 ntBASIC5.22□□□□□ -1.57
EFCC1Q9HA90 AL391684.1-202ENST00000641293 1636 ntBASIC5.22□□□□□ -1.57
EFCC1Q9HA90 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.22□□□□□ -1.57
EFCC1Q9HA90 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
EFCC1Q9HA90 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
EFCC1Q9HA90 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
EFCC1Q9HA90 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
EFCC1Q9HA90 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.21□□□□□ -1.57
EFCC1Q9HA90 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 Y_RNA.297-201ENST00000364950 91 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 RNU6-187P-201ENST00000384139 106 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 RNU6-708P-201ENST00000384217 107 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 Y_RNA.533-201ENST00000384596 114 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 MIR200C-201ENST00000384980 68 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 MIR93-201ENST00000385024 80 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 RNU6-325P-201ENST00000411132 105 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 RPL31P2-201ENST00000413849 377 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 UBE2D3P2-201ENST00000424409 445 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 MYL8P-204ENST00000431574 518 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 AC004866.2-201ENST00000438285 481 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 HMGB1P25-201ENST00000468402 607 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 AC006499.6-201ENST00000511169 607 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 SCARNA13-201ENST00000516672 275 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 AC022080.3-201ENST00000544433 482 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 AC069240.1-201ENST00000548774 375 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 RPL23AP87-202ENST00000573039 466 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 AC025946.2-201ENST00000603398 234 ntBASIC5.21□□□□□ -1.58
EFCC1Q9HA90 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
EFCC1Q9HA90 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 RNU6-371P-201ENST00000364283 108 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 Y_RNA.539-201ENST00000384635 107 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 MIR135A2-201ENST00000384854 100 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 MIR548H3-201ENST00000408771 118 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 SSXP9-201ENST00000417503 292 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AC007389.2-201ENST00000434630 306 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AC008264.1-201ENST00000447612 367 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 FCF1P4-201ENST00000448326 183 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 RNU6-953P-201ENST00000459154 107 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 MED28P2-201ENST00000475771 317 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 RNU6-840P-201ENST00000517275 65 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AL355877.2-201ENST00000603670 358 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AL591516.1-201ENST00000611326 274 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AC004792.1-201ENST00000614523 137 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AL450472.3-201ENST00000615578 367 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 FTX_2.1-201ENST00000618816 94 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 MIR8059-201ENST00000620427 81 ntBASIC5.2□□□□□ -1.58
EFCC1Q9HA90 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFCC1Q9HA90 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 AP001148.1-201ENST00000624124 2359 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 Y_RNA.20-201ENST00000362479 113 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 Y_RNA.29-201ENST00000362570 113 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 RNU1-20P-201ENST00000363314 162 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 Y_RNA.274-201ENST00000364714 101 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 Y_RNA.785-201ENST00000384290 109 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 MIR215-201ENST00000384858 110 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 RNU6-821P-201ENST00000390995 107 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 RNU6-121P-201ENST00000410525 99 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 RNU2-25P-201ENST00000411041 191 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 RNU2-14P-201ENST00000411053 191 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 AL353748.1-201ENST00000440753 474 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 RPS11P1-201ENST00000451072 473 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 ISCUP1-201ENST00000454451 448 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 snoU13.24-201ENST00000458998 104 ntBASIC5.19□□□□□ -1.58
EFCC1Q9HA90 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
EFCC1Q9HA90 AC113155.1-201ENST00000511141 769 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms