Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 AL731532.1-201ENST00000623972 4236 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 OR4F13P-202ENST00000560066 2054 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 Y_RNA.123-201ENST00000363338 102 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 RNU6-626P-201ENST00000363354 107 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 RNU6-879P-201ENST00000364328 108 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 PTMAP5-201ENST00000393073 333 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 RNU2-22P-201ENST00000411266 212 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 WARS2P1-201ENST00000429678 537 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 AP000936.3-201ENST00000438127 255 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 CYCSP32-201ENST00000440548 321 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 RPL23AP3-201ENST00000453844 468 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 snoU13.30-201ENST00000458951 104 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 RN7SKP289-201ENST00000517244 295 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 AC122688.1-201ENST00000541494 223 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 RN7SL703P-201ENST00000578485 302 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 AC053481.4-201ENST00000583164 216 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 MIR6852-201ENST00000621699 66 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 MIR3658-201ENST00000636291 56 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL25A1Q9BXS0 MAPK10-349ENST00000641767 3661 ntBASIC4.96□□□□□ -1.61
COL25A1Q9BXS0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL25A1Q9BXS0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.96□□□□□ -1.61
COL25A1Q9BXS0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
COL25A1Q9BXS0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.96□□□□□ -1.61
COL25A1Q9BXS0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
COL25A1Q9BXS0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
COL25A1Q9BXS0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 RNU6-1175P-201ENST00000365200 107 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 RNU6-76P-201ENST00000384060 104 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 RNU2-21P-201ENST00000410368 188 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 RPS12P23-201ENST00000419579 400 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 RPS20P1-201ENST00000434853 354 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 AL500522.2-201ENST00000448562 343 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 SUMO2P6-201ENST00000505273 288 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 FCF1P8-201ENST00000510322 597 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 RN7SKP179-201ENST00000516126 217 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 TRAV37-201ENST00000553906 342 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 MIR6864-201ENST00000617935 70 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 AC006001.4-201ENST00000622243 395 ntBASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL25A1Q9BXS0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNU6-227P-201ENST00000362865 103 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNU1-59P-201ENST00000364829 162 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 SNORA73.2-201ENST00000364946 201 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNU4-17P-201ENST00000365598 141 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNU6-741P-201ENST00000383889 107 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNU6-20P-201ENST00000384106 107 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 MIR137-201ENST00000385223 102 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNA5SP213-201ENST00000391031 106 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 SNORA77-201ENST00000408716 125 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 TBCAP2-201ENST00000416175 326 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RPS29P9-201ENST00000440360 171 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms