Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RPL39P29-201ENST00000447779 157 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 MTCO3P35-201ENST00000485582 781 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 MTCO2P32-201ENST00000514865 403 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 RNU6-928P-201ENST00000516876 104 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 ERHP1-201ENST00000523006 310 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.48□□□□□ -2.33
COL12A1Q99715 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
COL12A1Q99715 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
COL12A1Q99715 Y_RNA.468-201ENST00000384298 102 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.48□□□□□ -2.33
COL12A1Q99715 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.48□□□□□ -2.33
COL12A1Q99715 Z80107.1-201ENST00000436830 412 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.48□□□□□ -2.33
COL12A1Q99715 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.48□□□□□ -2.33
COL12A1Q99715 HMGN2P9-201ENST00000476875 229 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.48□□□□□ -2.33
COL12A1Q99715 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
COL12A1Q99715 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.48□□□□□ -2.33
COL12A1Q99715 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.48□□□□□ -2.33
COL12A1Q99715 AC023824.2-201ENST00000566185 400 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 AC008739.2-201ENST00000597006 317 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 AL096840.1-201ENST00000603287 93 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 AL136363.1-201ENST00000605349 337 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.48□□□□□ -2.33
COL12A1Q99715 SNORD95.1-201ENST00000364099 68 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 Y_RNA.552-201ENST00000384665 112 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
COL12A1Q99715 SSR1P1-201ENST00000407630 814 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 MTND5P14-201ENST00000441481 1267 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.47□□□□□ -2.33
COL12A1Q99715 AC010683.1-201ENST00000473673 378 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 SNORA3.4-201ENST00000515969 96 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 AP003355.1-201ENST00000518956 587 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 CYP4A27P-201ENST00000567218 190 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 AC006213.5-201ENST00000619673 288 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 SNORA38-201ENST00000363946 132 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 RNU6-629P-201ENST00000384061 103 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 MIR676-201ENST00000390702 67 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.47□□□□□ -2.33
COL12A1Q99715 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
COL12A1Q99715 RPS24P6-201ENST00000452670 400 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 EIF4EP5-201ENST00000528228 640 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 HSBP1P1-201ENST00000555205 166 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.47□□□□□ -2.33
COL12A1Q99715 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.47□□□□□ -2.33
COL12A1Q99715 AC100821.1-201ENST00000523153 2479 ntBASIC0.47□□□□□ -2.33
COL12A1Q99715 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
COL12A1Q99715 RNU6-19P-201ENST00000384718 107 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AL161449.1-201ENST00000414531 1199 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AL606489.2-201ENST00000433886 234 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AC027575.1-201ENST00000481064 460 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.46□□□□□ -2.34
COL12A1Q99715 RPL30P5-201ENST00000494923 336 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AC109927.2-201ENST00000506416 303 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AC118282.2-201ENST00000508739 374 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AP005902.1-201ENST00000521358 186 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AC025857.1-201ENST00000525252 377 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.46□□□□□ -2.34
COL12A1Q99715 AC003001.2-201ENST00000616294 831 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
COL12A1Q99715 RNU6-1181P-201ENST00000384191 106 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AP002784.2-201ENST00000397300 549 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 RNU6-1064P-201ENST00000410626 104 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.46□□□□□ -2.34
COL12A1Q99715 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.46□□□□□ -2.34
COL12A1Q99715 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.46□□□□□ -2.34
COL12A1Q99715 AC090616.3-201ENST00000582184 217 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 AC106791.2-201ENST00000604680 391 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 ELOCP5-201ENST00000604924 333 ntBASIC0.46□□□□□ -2.34
COL12A1Q99715 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
COL12A1Q99715 Y_RNA.447-201ENST00000384184 113 ntBASIC0.45□□□□□ -2.34
COL12A1Q99715 SNORA8.3-201ENST00000384679 139 ntBASIC0.45□□□□□ -2.34
COL12A1Q99715 U8.14-201ENST00000390843 143 ntBASIC0.45□□□□□ -2.34
COL12A1Q99715 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.45□□□□□ -2.34
COL12A1Q99715 MTND5P15-201ENST00000434246 349 ntBASIC0.45□□□□□ -2.34
COL12A1Q99715 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.45□□□□□ -2.34
COL12A1Q99715 RRN3P3-201ENST00000549207 578 ntBASIC0.45□□□□□ -2.34
COL12A1Q99715 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.45□□□□□ -2.34
COL12A1Q99715 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.45□□□□□ -2.34
COL12A1Q99715 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.45□□□□□ -2.34
COL12A1Q99715 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
COL12A1Q99715 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
COL12A1Q99715 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
COL12A1Q99715 MIR146A-201ENST00000385201 99 ntBASIC0.45□□□□□ -2.34
COL12A1Q99715 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.45□□□□□ -2.34
COL12A1Q99715 AC078857.1-201ENST00000469870 667 ntBASIC0.45□□□□□ -2.34
COL12A1Q99715 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.45□□□□□ -2.34
COL12A1Q99715 AL160236.1-201ENST00000556317 195 ntBASIC0.45□□□□□ -2.34
COL12A1Q99715 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.45□□□□□ -2.34
COL12A1Q99715 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.45□□□□□ -2.34
COL12A1Q99715 SDAD1P2-201ENST00000441308 2028 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 RNU6-452P-201ENST00000384406 107 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 Y_RNA.495-201ENST00000384435 112 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 MIR147B-201ENST00000390185 80 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 RNU6-700P-201ENST00000391043 107 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 RABEPKP1-201ENST00000440529 1026 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 snoU13.11-201ENST00000459219 104 ntBASIC0.44□□□□□ -2.34
COL12A1Q99715 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.44□□□□□ -2.34
COL12A1Q99715 NUTF2P8-201ENST00000604593 363 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms