Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AL121579.1-201ENST00000555129 305 ntBASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 UBE2L2-201ENST00000254302 429 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 RNU6-741P-201ENST00000383889 107 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 SNORA44-201ENST00000384584 132 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 MT-TL1-201ENST00000386347 75 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AL356776.1-201ENST00000406574 447 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AL159169.1-201ENST00000421119 127 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AC009237.8-201ENST00000445492 379 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 RPL23AP11-201ENST00000475260 469 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 RPL39P36-201ENST00000490784 156 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AC139783.2-201ENST00000504847 1145 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 FCF1P8-201ENST00000510322 597 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 RNU6-143P-201ENST00000516942 93 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 MTND4P7-201ENST00000523876 130 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AL121576.1-201ENST00000556055 276 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AL138976.2-201ENST00000563989 694 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 RPL12P50-201ENST00000603116 116 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AC013553.2-201ENST00000604244 589 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 BNIP3P10-201ENST00000605360 577 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 uc_338.34-201ENST00000617467 174 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 AP003122.6-201ENST00000623831 495 ntBASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM43Q96BQ3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 Y_RNA.160-201ENST00000363677 92 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 SNORA5B-201ENST00000363786 132 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 RNU4-66P-201ENST00000365199 138 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 RNU4-47P-201ENST00000410876 114 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 Z85995.1-201ENST00000415547 335 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AL353678.1-201ENST00000422735 741 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 RPL36AP53-201ENST00000432891 316 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 TAAR7P-201ENST00000436141 242 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AC104058.1-201ENST00000448028 297 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 RNU7-180P-201ENST00000459240 63 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AL160314.1-201ENST00000490836 438 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AC110794.1-201ENST00000505816 425 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 BNIP3P9-201ENST00000603714 553 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AC098826.3-201ENST00000603823 466 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AL035413.2-201ENST00000604801 525 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 MIR7106-201ENST00000612419 65 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AL390240.1-201ENST00000612950 384 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AC006504.8-201ENST00000621046 635 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AC103858.2-201ENST00000621471 543 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 AC118273.1-201ENST00000525324 3006 ntBASIC3.76□□□□□ -1.81
TRIM43Q96BQ3 FAM35DP-201ENST00000323387 2712 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 Y_RNA.231-201ENST00000364358 102 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 RNU6-7-201ENST00000364784 107 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 Y_RNA.303-201ENST00000364998 94 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 RNU6-8-201ENST00000365467 107 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 RNU6-328P-201ENST00000390887 106 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 AC138393.2-201ENST00000414742 246 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 AL121601.2-201ENST00000438019 707 ntBASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.75□□□□□ -1.81
TRIM43Q96BQ3 MTND3P16-201ENST00000452205 344 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms