Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.24□□□□□ -1.73
ERCC4Q92889 BDH2P1-201ENST00000602288 736 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AL670379.4-201ENST00000605279 254 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 SNORA62.6-201ENST00000606322 83 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.24□□□□□ -1.73
ERCC4Q92889 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 XIST_intron.1-201ENST00000619444 68 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.24□□□□□ -1.73
ERCC4Q92889 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ERCC4Q92889 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ERCC4Q92889 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.24□□□□□ -1.73
ERCC4Q92889 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ERCC4Q92889 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ERCC4Q92889 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ERCC4Q92889 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.23□□□□□ -1.73
ERCC4Q92889 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ERCC4Q92889 RNU6-1252P-201ENST00000363054 104 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 Y_RNA.128-201ENST00000363391 112 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 Y_RNA.132-201ENST00000363421 102 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 RNU6-715P-201ENST00000365204 103 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 RNU6-1074P-201ENST00000383995 104 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 RNU6-393P-201ENST00000384475 107 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 RNA5SP219-201ENST00000390940 113 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 RNY4P36-201ENST00000391116 96 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 SNORA57.1-201ENST00000391227 145 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ERCC4Q92889 RPLP0P7-201ENST00000416050 667 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 BTF3L4P3-201ENST00000418879 476 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 SKA2P1-201ENST00000425592 390 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.23□□□□□ -1.73
ERCC4Q92889 AC107399.1-201ENST00000451226 265 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 COPS8P3-201ENST00000526024 482 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 AP005639.2-201ENST00000527592 928 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ERCC4Q92889 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.23□□□□□ -1.73
ERCC4Q92889 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.23□□□□□ -1.73
ERCC4Q92889 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.23□□□□□ -1.73
ERCC4Q92889 AC012182.1-201ENST00000570133 895 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 VN1R85P-201ENST00000601587 426 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 AC124303.1-201ENST00000605703 360 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 AL627309.6-201ENST00000606857 840 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 AL133215.3-201ENST00000609801 448 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 AL138726.1-201ENST00000614873 333 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 AC090971.5-201ENST00000621102 293 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 MTND4LP32-201ENST00000636111 270 ntBASIC4.23□□□□□ -1.73
ERCC4Q92889 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ERCC4Q92889 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ERCC4Q92889 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ERCC4Q92889 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ERCC4Q92889 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.22□□□□□ -1.73
ERCC4Q92889 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
ERCC4Q92889 PWAR6-201ENST00000552334 4618 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ERCC4Q92889 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ERCC4Q92889 AL133383.2-201ENST00000622958 2336 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ERCC4Q92889 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ERCC4Q92889 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.22□□□□□ -1.73
ERCC4Q92889 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ERCC4Q92889 SNORA31-201ENST00000362607 130 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 RNU6-434P-201ENST00000384376 107 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 MIR607-201ENST00000385241 96 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 CISD1P1-201ENST00000393907 327 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 AL139397.2-201ENST00000404529 772 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 MIR548P-201ENST00000408336 84 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.22□□□□□ -1.73
ERCC4Q92889 AC005019.1-201ENST00000436455 431 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 FABP5P14-201ENST00000437273 393 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.22□□□□□ -1.73
ERCC4Q92889 MTND4P19-201ENST00000446659 478 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 AC008264.1-201ENST00000447612 367 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.22□□□□□ -1.73
ERCC4Q92889 RPL21P11-201ENST00000461458 483 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 RPL23AP14-201ENST00000468281 468 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.22□□□□□ -1.73
ERCC4Q92889 AP002812.1-201ENST00000495378 474 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 HMGB1P22-201ENST00000505315 124 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 RNU6-1170P-201ENST00000515974 106 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 SNORA14.1-201ENST00000516113 141 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.22□□□□□ -1.73
ERCC4Q92889 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.22□□□□□ -1.73
ERCC4Q92889 APOOP3-201ENST00000536787 586 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 SNRPGP17-201ENST00000603780 214 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 AP001330.4-201ENST00000604350 154 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 AC098657.3-201ENST00000620434 263 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ERCC4Q92889 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.22□□□□□ -1.73
ERCC4Q92889 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.22□□□□□ -1.73
ERCC4Q92889 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ERCC4Q92889 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ERCC4Q92889 AC007656.2-201ENST00000624902 4547 ntBASIC4.22□□□□□ -1.73
ERCC4Q92889 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.21□□□□□ -1.73
ERCC4Q92889 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
ERCC4Q92889 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
ERCC4Q92889 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ERCC4Q92889 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.21□□□□□ -1.73
ERCC4Q92889 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERCC4Q92889 SDAD1P2-201ENST00000441308 2028 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 SNORD116-11-201ENST00000383882 92 ntBASIC4.21□□□□□ -1.74
ERCC4Q92889 Y_RNA.395-201ENST00000383945 109 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms